RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 CTDSPL2Q05D32 466 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 ITIH3Q06033 890 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 ZNF543Q08ER8 600 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 LPIN1Q14693 890 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 RSPO4Q2I0M5 234 aaPredicted RBP15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 KIAA0319Q5VV43 1072 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 PLCD3Q8N3E9 789 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 TDRD5Q8NAT2 981 aaKnown RBP15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 MLXIPQ9HAP2 919 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 ZSWIM6Q9HCJ5 1215 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 SETD4Q9NVD3 440 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 UBA1P22314 1058 aaKnown RBP15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 MCM5P33992 734 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 MTHFRP42898 656 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 PAN2Q504Q3 1202 aaKnown RBP15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 CCDC178Q5BJE1 867 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 TSHZ1Q6ZSZ6 1077 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 RUFY3Q7L099 469 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 DHX32Q7L7V1 743 aaKnown RBP15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 CRIPAKQ8N1N5 446 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 CASP10Q92851 521 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 TMEM47Q9BQJ4 181 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 MTA3Q9BTC8 594 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 PXMP2Q9NR77 195 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 ZNF215Q9UL58 517 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 TTC3P53804 2025 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 USP24Q9UPU5 2620 aa15.54■□□□□ 0.08
RAPGEF1-204ENST00000414781 CFAP47Q6ZTR5 3102 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 NOP56O00567 594 aaKnown RBP15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 FSCN2O14926 492 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 PPFIA3O75145 1194 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 RPLP2P05387 115 aaKnown RBP15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 ADAM17P78536 824 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 ARHGAP4P98171 946 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 SART3Q15020 963 aaKnown RBP15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 RRP12Q5JTH9 1297 aaKnown RBP15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 GPATCH4Q5T3I0 446 aaKnown RBP15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 TBC1D10CQ8IV04 446 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 LMBR1Q8WVP7 490 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 APOL5Q9BWW9 433 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 ADAM7Q9H2U9 754 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 SMOC2Q9H3U7 446 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 POMKQ9H5K3 350 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 LZTS1Q9Y250 596 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 USTQ9Y2C2 406 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 KIAA1217Q5T5P2 1943 aa15.53■□□□□ 0.08
RAPGEF1-204ENST00000414781 NRCAMQ92823 1304 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 PI15O43692 258 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 FGF18O76093 207 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 ASGR2P07307 311 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 NPR3P17342 541 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 MCM2P49736 904 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 NEK4P51957 841 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 FGD1P98174 961 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 MGAT3Q09327 533 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 ANKRD1Q15327 319 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 ADCK5Q3MIX3 580 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 FBXO47Q5MNV8 452 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 FAM43BQ6ZT52 329 aaPredicted RBP15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 IQCA1Q86XH1 822 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 GPR161Q8N6U8 529 aaKnown RBP15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 TBC1D5Q92609 795 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 KIF2CQ99661 725 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 MRPL11Q9Y3B7 192 aaKnown RBP15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 R4GN57 208 aa15.52■□□□□ 0.08
RAPGEF1-204ENST00000414781 ERICH2A1L162 156 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 SORBS3O60504 671 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 SNHG28P0DPA3 235 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 RPS6KB1P23443 525 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 ERVFC1P60507 584 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 SPOUT1Q5T280 376 aaKnown RBP15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 STOX1Q6ZVD7 989 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 THNSL1Q8IYQ7 743 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 TMTC2Q8N394 836 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 LINC01599Q8WXQ3 324 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 TMEM87BQ96K49 555 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 NGRNQ9NPE2 291 aaKnown RBP15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 PDRG1Q9NUG6 133 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 TCP11L1Q9NUJ3 509 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 LIMD1Q9UGP4 676 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 LRFN2Q9ULH4 789 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 SQORQ9Y6N5 450 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 FAM208BQ5VWN6 2430 aa15.51■□□□□ 0.07
RAPGEF1-204ENST00000414781 B4E1Z4 1266 aa15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 SCG2P13521 617 aa15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 ANP32AP39687 249 aaKnown RBP15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 CDC37Q16543 378 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 LLGL2Q6P1M3 1020 aa15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 PDCD2LQ9BRP1 358 aa15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 UBAC1Q9BSL1 405 aa15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 TMEM260Q9NX78 707 aa15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 ZSWIM5Q9P217 1185 aa15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 PUF60Q9UHX1 559 aaKnown RBP15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 FBXL21Q9UKT6 434 aa15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 TAF6LQ9Y6J9 622 aa15.5■□□□□ 0.07
RAPGEF1-204ENST00000414781 PRC1O43663 620 aa15.49■□□□□ 0.07
RAPGEF1-204ENST00000414781 MYCLP12524 364 aaPredicted RBP15.49■□□□□ 0.07
RAPGEF1-204ENST00000414781 EXOSC10Q01780 885 aaKnown RBP15.49■□□□□ 0.07
RAPGEF1-204ENST00000414781 PLPP4Q5VZY2 271 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms