RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 KIAA1524Q8TCG1 905 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 FBF1Q8TES7 1133 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 ANKRD24Q8TF21 1146 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 FNIP1Q8TF40 1166 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 NUP133Q8WUM0 1156 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 ZNF606Q8WXB4 792 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 PPM1MQ96MI6 270 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 ELAC2Q9BQ52 826 aaKnown RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 SARGQ9BW04 601 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 SLC13A1Q9BZW2 595 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 NCOA5Q9HCD5 579 aaKnown RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 CD320Q9NPF0 282 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 FANCFQ9NPI8 374 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 PLCB1Q9NQ66 1216 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 CWC15Q9P013 229 aaKnown RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 ZNF112Q9UJU3 913 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 TMX2Q9Y320 296 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 C2CD2Q9Y426 696 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 AFG3L2Q9Y4W6 797 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 ITIH6Q6UXX5 1313 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 SYNJ2BP-COX16A0A087WUM0 186 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 GOLGA6L10A0A0M3HER8 536 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 E2F8A0AVK6 867 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 RASA4BC9J798 803 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 INO80B-WBP1J3KQ70 363 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 MCF2LO15068 1137 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 KLF4O43474 513 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 FOXD2O60548 495 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 TADA3O75528 432 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 USP2O75604 605 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 B3GALNT1O75752 331 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 CYP17A1P05093 508 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 LDHBP07195 334 aaKnown RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 MED14OSP0DP75 135 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 KRT10P13645 584 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 ZNF24P17028 368 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 RPS6KB1P23443 525 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 HSPA1LP34931 641 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 HOXD12P35452 270 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 CCT5P48643 541 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 MXI1P50539 228 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 OXCT1P55809 520 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 GSCP56915 257 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 ZNF280AP59817 542 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 RING1Q06587 406 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 ADCY2Q08462 1091 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 PIN1Q13526 163 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 RAB33AQ14088 237 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 POSTNQ15063 836 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 PDCD2Q16342 344 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 RRP12Q5JTH9 1297 aaKnown RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 METTL24Q5JXM2 366 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 FYB2Q5VWT5 728 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 WWC2Q6AWC2 1192 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 MCTP2Q6DN12 878 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 NEK10Q6ZWH5 1172 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 CCDC80Q76M96 950 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 OTOP3Q7RTS5 596 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 RALYLQ86SE5 291 aaKnown RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 LURAP1LQ8IV03 231 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 TMEM151BQ8IW70 566 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 CCDC65Q8IXS2 484 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 PEX5LQ8IYB4 626 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 C7orf61Q8IZ16 206 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 NAXEQ8NCW5 288 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 SUN5Q8TC36 379 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 USP33Q8TEY7 942 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 RBM18Q96H35 190 aaKnown RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 DUSP23Q9BVJ7 150 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 RTFDC1Q9BY42 306 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 ASPSCR1Q9BZE9 553 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 LRRCC1Q9C099 1032 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 TNKS2Q9H2K2 1166 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 CNNM2Q9H8M5 875 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 ZNF408Q9H9D4 720 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 PIDD1Q9HB75 910 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 ATP6V0A4Q9HBG4 840 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 ZCCHC17Q9NP64 241 aaKnown RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 ALG13Q9NP73 1137 aaKnown RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 BLOC1S4Q9NUP1 217 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 MRGBPQ9NV56 204 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 ARGLU1Q9NWB6 273 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 NKIRAS2Q9NYR9 191 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 TBC1D7Q9P0N9 293 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 SPATA7Q9P0W8 599 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 WDR35Q9P2L0 1181 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 MCM8Q9UJA3 840 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 PLAGL2Q9UPG8 496 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 MRPL11Q9Y3B7 192 aaKnown RBP4.1□□□□□ -1.75
SF3B1-203ENST00000414174 KIF3AQ9Y496 699 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 PCDHGB3Q9Y5G1 929 aa4.1□□□□□ -1.75
SF3B1-203ENST00000414174 A0A1B0GVC2 190 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 FAM221AA4D161 298 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 DCDC2CA8MYV0 355 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 AKR1B15C9JRZ8 316 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-203ENST00000414174 KLHL41O60662 606 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 USP17L7P0C7H9 530 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 SLFN14P0C7P3 912 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms