RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 GABBR1Q9UBS5 961 aa29.79■■■□□ 2.36
VEGFA-207ENST00000413642 PCDHA10Q9Y5I2 948 aa29.79■■■□□ 2.36
VEGFA-207ENST00000413642 CDY2AQ9Y6F7 541 aa29.79■■■□□ 2.36
VEGFA-207ENST00000413642 KIF28PB7ZC32 967 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 RFXAPO00287 272 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 CHMP2AO43633 222 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 TAP1Q03518 808 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 Q4G0T1 1027 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 MTHFD1LQ6UB35 978 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 RSPH3Q86UC2 560 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 KIF2CQ99661 725 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 SAMM50Q9Y512 469 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 PCDHA2Q9Y5H9 948 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 MAFBQ9Y5Q3 323 aaPredicted RBP29.78■■■□□ 2.36
VEGFA-207ENST00000413642 GBF1Q92538 1859 aa29.78■■■□□ 2.36
VEGFA-207ENST00000413642 CYP3A7-CYP3A51PA0A087WV96 503 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 HBP1O60381 514 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 EFCAB14O75071 495 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 PSAPP07602 524 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 CYP3A7P24462 503 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 KLRC1P26715 233 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 FOSBP53539 338 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 MRPS6P82932 125 aaKnown RBP29.77■■■□□ 2.36
VEGFA-207ENST00000413642 LPIN1Q14693 890 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 EARS2Q5JPH6 523 aaKnown RBP29.77■■■□□ 2.36
VEGFA-207ENST00000413642 CKAP2LQ8IYA6 745 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 SMAP1Q8IYB5 467 aaPredicted RBP29.77■■■□□ 2.36
VEGFA-207ENST00000413642 TNPO1Q92973 898 aaKnown RBP29.77■■■□□ 2.36
VEGFA-207ENST00000413642 MBOAT7Q96N66 472 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 RIT2Q99578 217 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 UNC45AQ9H3U1 944 aa29.77■■■□□ 2.36
VEGFA-207ENST00000413642 ZBTB42B2RXF5 422 aa29.76■■■□□ 2.35
VEGFA-207ENST00000413642 GAS7O60861 476 aa29.76■■■□□ 2.35
VEGFA-207ENST00000413642 GJB5O95377 273 aa29.76■■■□□ 2.35
VEGFA-207ENST00000413642 XBP1P17861 261 aa29.76■■■□□ 2.35
VEGFA-207ENST00000413642 LRCH2Q5VUJ6 765 aa29.76■■■□□ 2.35
VEGFA-207ENST00000413642 MYOCDQ8IZQ8 938 aa29.76■■■□□ 2.35
VEGFA-207ENST00000413642 GAS2L1Q99501 681 aaPredicted RBP29.76■■■□□ 2.35
VEGFA-207ENST00000413642 TEKT3Q9BXF9 490 aa29.76■■■□□ 2.35
VEGFA-207ENST00000413642 IFIH1Q9BYX4 1025 aaKnown RBP29.76■■■□□ 2.35
VEGFA-207ENST00000413642 DISC1Q9NRI5 854 aa29.76■■■□□ 2.35
VEGFA-207ENST00000413642 TCEAL9Q9UHQ7 104 aa29.76■■■□□ 2.35
VEGFA-207ENST00000413642 CCDC194A0A1B0GVG4 234 aa29.75■■■□□ 2.35
VEGFA-207ENST00000413642 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.75■■■□□ 2.35
VEGFA-207ENST00000413642 FAM205CA6NFA0 338 aa29.75■■■□□ 2.35
VEGFA-207ENST00000413642 EPOPA6NHQ4 379 aa29.75■■■□□ 2.35
VEGFA-207ENST00000413642 SLC37A4O43826 429 aa29.75■■■□□ 2.35
VEGFA-207ENST00000413642 PSMD10O75832 226 aa29.75■■■□□ 2.35
VEGFA-207ENST00000413642 LETM2Q2VYF4 491 aa29.75■■■□□ 2.35
VEGFA-207ENST00000413642 PIK3AP1Q6ZUJ8 805 aa29.75■■■□□ 2.35
VEGFA-207ENST00000413642 USP38Q8NB14 1042 aa29.75■■■□□ 2.35
VEGFA-207ENST00000413642 WASF1Q92558 559 aa29.75■■■□□ 2.35
VEGFA-207ENST00000413642 COL6A3P12111 3177 aa29.74■■■□□ 2.35
VEGFA-207ENST00000413642 WDR64B1ANS9 1081 aa29.74■■■□□ 2.35
VEGFA-207ENST00000413642 AMHP03971 560 aa29.74■■■□□ 2.35
VEGFA-207ENST00000413642 IGFBP4P22692 258 aa29.74■■■□□ 2.35
VEGFA-207ENST00000413642 NR5A1Q13285 461 aa29.74■■■□□ 2.35
VEGFA-207ENST00000413642 UGCGQ16739 394 aa29.74■■■□□ 2.35
VEGFA-207ENST00000413642 FBXO47Q5MNV8 452 aa29.74■■■□□ 2.35
VEGFA-207ENST00000413642 AGO3Q9H9G7 860 aaKnown RBP29.74■■■□□ 2.35
VEGFA-207ENST00000413642 DDX25Q9UHL0 483 aaKnown RBP29.74■■■□□ 2.35
VEGFA-207ENST00000413642 SMIM35A0A1B0GVV1 85 aa29.73■■■□□ 2.35
VEGFA-207ENST00000413642 ZNF862O60290 1169 aa29.73■■■□□ 2.35
VEGFA-207ENST00000413642 ZNF484Q5JVG2 852 aa29.73■■■□□ 2.35
VEGFA-207ENST00000413642 MOXD1Q6UVY6 613 aa29.73■■■□□ 2.35
VEGFA-207ENST00000413642 ETNPPLQ8TBG4 499 aa29.73■■■□□ 2.35
VEGFA-207ENST00000413642 PPM1EQ8WY54 764 aa29.73■■■□□ 2.35
VEGFA-207ENST00000413642 RAD9AQ99638 391 aa29.73■■■□□ 2.35
VEGFA-207ENST00000413642 PTPRSQ13332 1948 aa29.73■■■□□ 2.35
VEGFA-207ENST00000413642 IGSF9BQ9UPX0 1349 aa29.72■■■□□ 2.35
VEGFA-207ENST00000413642 NEK8Q86SG6 692 aa29.72■■■□□ 2.35
VEGFA-207ENST00000413642 BBXQ8WY36 941 aaPredicted RBP29.72■■■□□ 2.35
VEGFA-207ENST00000413642 ARNTL2Q8WYA1 636 aa29.72■■■□□ 2.35
VEGFA-207ENST00000413642 LIMCH1Q9UPQ0 1083 aa29.72■■■□□ 2.35
VEGFA-207ENST00000413642 TRPV2Q9Y5S1 764 aa29.72■■■□□ 2.35
VEGFA-207ENST00000413642 UPP2O95045 317 aa29.71■■■□□ 2.35
VEGFA-207ENST00000413642 CD52P31358 61 aa29.71■■■□□ 2.35
VEGFA-207ENST00000413642 IER5Q5VY09 327 aa29.71■■■□□ 2.35
VEGFA-207ENST00000413642 CCDC83Q8IWF9 413 aa29.71■■■□□ 2.35
VEGFA-207ENST00000413642 KIAA0319LQ8IZA0 1049 aa29.71■■■□□ 2.35
VEGFA-207ENST00000413642 APBB2Q92870 758 aa29.71■■■□□ 2.35
VEGFA-207ENST00000413642 COL1A2P08123 1366 aa29.71■■■□□ 2.35
VEGFA-207ENST00000413642 CHD9Q3L8U1 2897 aa29.7■■■□□ 2.35
VEGFA-207ENST00000413642 C22orf31O95567 290 aa29.7■■■□□ 2.35
VEGFA-207ENST00000413642 B3GNT9Q6UX72 402 aa29.7■■■□□ 2.35
VEGFA-207ENST00000413642 MIER3Q7Z3K6 550 aa29.7■■■□□ 2.35
VEGFA-207ENST00000413642 TNFRSF25Q93038 417 aa29.7■■■□□ 2.35
VEGFA-207ENST00000413642 CELF4Q9BZC1 486 aaKnown RBP29.7■■■□□ 2.35
VEGFA-207ENST00000413642 CDHR5Q9HBB8 845 aa29.7■■■□□ 2.35
VEGFA-207ENST00000413642 KRT2P35908 639 aa29.69■■■□□ 2.34
VEGFA-207ENST00000413642 JAK3P52333 1124 aa29.69■■■□□ 2.34
VEGFA-207ENST00000413642 CCDC85BQ15834 202 aaPredicted RBP29.69■■■□□ 2.34
VEGFA-207ENST00000413642 TSHZ1Q6ZSZ6 1077 aa29.69■■■□□ 2.34
VEGFA-207ENST00000413642 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.69■■■□□ 2.343e-13■■□□□ 13.7
VEGFA-207ENST00000413642 TOP1MTQ969P6 601 aa29.69■■■□□ 2.34
VEGFA-207ENST00000413642 PPP1R16BQ96T49 567 aa29.69■■■□□ 2.34
VEGFA-207ENST00000413642 LINC01553A4QN01 128 aa29.68■■■□□ 2.34
VEGFA-207ENST00000413642 CCNT1O60563 726 aaKnown RBP29.68■■■□□ 2.34
VEGFA-207ENST00000413642 SFNP31947 248 aa29.68■■■□□ 2.34
VEGFA-207ENST00000413642 PRKCEQ02156 737 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms