RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 RDM1Q8NG50 284 aa16.88■□□□□ 0.29
PUDP-202ENST00000412827 PPTC7Q8NI37 304 aa16.88■□□□□ 0.29
PUDP-202ENST00000412827 LARP4BQ92615 738 aaKnown RBP16.88■□□□□ 0.29
PUDP-202ENST00000412827 SPATA33Q96N06 139 aa16.88■□□□□ 0.29
PUDP-202ENST00000412827 UPF3AQ9H1J1 476 aaKnown RBP16.88■□□□□ 0.29
PUDP-202ENST00000412827 SLC9A2Q9UBY0 812 aa16.88■□□□□ 0.29
PUDP-202ENST00000412827 PVALEFA0A1B0GWK0 134 aa16.87■□□□□ 0.29
PUDP-202ENST00000412827 DYNC1LI2O43237 492 aaPredicted RBP16.87■□□□□ 0.29
PUDP-202ENST00000412827 KPNA6O60684 536 aa16.87■□□□□ 0.29
PUDP-202ENST00000412827 RPN1P04843 607 aaKnown RBP16.87■□□□□ 0.29
PUDP-202ENST00000412827 C6orf222P0C671 652 aaPredicted RBP16.87■□□□□ 0.29
PUDP-202ENST00000412827 PRR29P0C7W0 189 aa16.87■□□□□ 0.29
PUDP-202ENST00000412827 ERCC5P28715 1186 aaPredicted RBP16.87■□□□□ 0.29
PUDP-202ENST00000412827 SFNP31947 248 aa16.87■□□□□ 0.29
PUDP-202ENST00000412827 JAK3P52333 1124 aa16.87■□□□□ 0.29
PUDP-202ENST00000412827 FSCN1Q16658 493 aaKnown RBP16.87■□□□□ 0.29
PUDP-202ENST00000412827 DPCR1Q3MIW9 517 aa16.87■□□□□ 0.29
PUDP-202ENST00000412827 ZNF746Q6NUN9 644 aaPredicted RBP16.87■□□□□ 0.29
PUDP-202ENST00000412827 MTRQ99707 1265 aa16.87■□□□□ 0.29
PUDP-202ENST00000412827 BMP2KQ9NSY1 1161 aaPredicted RBP16.87■□□□□ 0.29
PUDP-202ENST00000412827 BLOC1S4Q9NUP1 217 aa16.87■□□□□ 0.29
PUDP-202ENST00000412827 WDR64B1ANS9 1081 aa16.86■□□□□ 0.29
PUDP-202ENST00000412827 KBTBD13C9JR72 458 aa16.86■□□□□ 0.29
PUDP-202ENST00000412827 CST5P28325 142 aaPredicted RBP16.86■□□□□ 0.29
PUDP-202ENST00000412827 ITGB3BPQ13352 177 aaPredicted RBP16.86■□□□□ 0.29
PUDP-202ENST00000412827 COL13A1Q5TAT6 717 aaPredicted RBP16.86■□□□□ 0.29
PUDP-202ENST00000412827 NCAPH2Q6IBW4 605 aa16.86■□□□□ 0.29
PUDP-202ENST00000412827 C11orf57Q6ZUT1 292 aaPredicted RBP16.86■□□□□ 0.29
PUDP-202ENST00000412827 U2AF1L4Q8WU68 220 aaKnown RBP16.86■□□□□ 0.29
PUDP-202ENST00000412827 ERCC4Q92889 916 aaPredicted RBP16.86■□□□□ 0.29
PUDP-202ENST00000412827 LENG1Q96BZ8 264 aaPredicted RBP16.86■□□□□ 0.29
PUDP-202ENST00000412827 HSD17B14Q9BPX1 270 aa16.86■□□□□ 0.29
PUDP-202ENST00000412827 TRIM9Q9C026 710 aa16.86■□□□□ 0.29
PUDP-202ENST00000412827 DNM3Q9UQ16 869 aa16.86■□□□□ 0.29
PUDP-202ENST00000412827 DDX39AO00148 427 aaKnown RBP16.85■□□□□ 0.29
PUDP-202ENST00000412827 BIN1O00499 593 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 ADCY6O43306 1168 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 ATP9AO75110 1047 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 ADAMTS4O75173 837 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 RHOBTB3O94955 611 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 SGPL1O95470 568 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 NKX3-2P78367 333 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 SP2Q02086 613 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 CUL4BQ13620 913 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 DGKDQ16760 1214 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 COBLL1Q53SF7 1204 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 GJC2Q5T442 439 aaPredicted RBP16.85■□□□□ 0.29
PUDP-202ENST00000412827 ZNF658Q5TYW1 1059 aaPredicted RBP16.85■□□□□ 0.29
PUDP-202ENST00000412827 LHX8Q68G74 356 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 MIS18BP1Q6P0N0 1132 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 CATSPER3Q86XQ3 398 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 GRAMD1CQ8IYS0 662 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 TNS4Q8IZW8 715 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 ANKLE1Q8NAG6 615 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 COPS5Q92905 334 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 PPP1R9BQ96SB3 815 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 SAMM50Q9Y512 469 aa16.85■□□□□ 0.29
PUDP-202ENST00000412827 A6NJR5 290 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 DNM1LO00429 736 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 DHX15O43143 795 aaKnown RBP16.84■□□□□ 0.29
PUDP-202ENST00000412827 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
PUDP-202ENST00000412827 MMP3P08254 477 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 SPATA31C1P0DKV0 1188 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 GJA8P48165 433 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 MYL5Q02045 173 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 SP4Q02446 784 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 PSMD2Q13200 908 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 GNASQ5JWF2 1037 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 SARM1Q6SZW1 724 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 ENOX1Q8TC92 643 aaKnown RBP16.84■□□□□ 0.29
PUDP-202ENST00000412827 AFG1LQ8WV93 481 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 SEPT1Q8WYJ6 367 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 EIF2AK1Q9BQI3 630 aaKnown RBP16.84■□□□□ 0.29
PUDP-202ENST00000412827 TSEN34Q9BSV6 310 aaKnown RBP16.84■□□□□ 0.29
PUDP-202ENST00000412827 AZI2Q9H6S1 392 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 ZNF215Q9UL58 517 aaPredicted RBP16.84■□□□□ 0.29
PUDP-202ENST00000412827 OGDHLQ9ULD0 1010 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 KIAA1024Q9UPX6 916 aa16.84■□□□□ 0.29
PUDP-202ENST00000412827 MOXD2PA6NHM9 499 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 CHMP2AO43633 222 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 DKC1O60832 514 aaKnown RBP eCLIP16.83■□□□□ 0.28
PUDP-202ENST00000412827 PPFIA4O75335 1185 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 MED24O75448 989 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 CABYRO75952 493 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 PGK1P00558 417 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 TFRCP02786 760 aaKnown RBP16.83■□□□□ 0.28
PUDP-202ENST00000412827 PSAPP07602 524 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 BMP6P22004 513 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 ACTR2P61160 394 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 FAM160B1Q5W0V3 765 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 UNC13DQ70J99 1090 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 MIER3Q7Z3K6 550 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 LUZP1Q86V48 1076 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 DHX40Q8IX18 779 aaKnown RBP16.83■□□□□ 0.28
PUDP-202ENST00000412827 ABHD8Q96I13 439 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 PDLIM2Q96JY6 352 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 NACC1Q96RE7 527 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 GPR20Q99678 358 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 KATNAL1Q9BW62 490 aa16.83■□□□□ 0.28
PUDP-202ENST00000412827 CRISPLD2Q9H0B8 497 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms