RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 UBE2OQ9C0C9 1292 aaKnown RBP14.83□□□□□ -0.04
HDAC8-210ENST00000412342 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.83□□□□□ -0.04
HDAC8-210ENST00000412342 TUBE1Q9UJT0 475 aa14.83□□□□□ -0.04
HDAC8-210ENST00000412342 NOL7Q9UMY1 257 aaKnown RBP14.83□□□□□ -0.04
HDAC8-210ENST00000412342 TRPC6Q9Y210 931 aa14.83□□□□□ -0.04
HDAC8-210ENST00000412342 PCDHB6Q9Y5E3 794 aa14.83□□□□□ -0.04
HDAC8-210ENST00000412342 MYH15Q9Y2K3 1946 aa14.83□□□□□ -0.04
HDAC8-210ENST00000412342 COL1A2P08123 1366 aa14.83□□□□□ -0.04
HDAC8-210ENST00000412342 A0A1W2PPC1 479 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 RRN3P2A6NIE6 340 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 RBAK-RBAKDNI3L0D1 243 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 BAG4O95429 457 aaKnown RBP14.82□□□□□ -0.04
HDAC8-210ENST00000412342 OATP04181 439 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 PDCP20941 246 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 PRKCEQ02156 737 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 PPIGQ13427 754 aaKnown RBP eCLIP14.82□□□□□ -0.04
HDAC8-210ENST00000412342 MBTPS1Q14703 1052 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 EPHA7Q15375 998 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 C9orf50Q5SZB4 431 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 RPAINQ86UA6 219 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 CCDC155Q8N6L0 562 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 TTC12Q9H892 705 aaPredicted RBP14.82□□□□□ -0.04
HDAC8-210ENST00000412342 IL23AQ9NPF7 189 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 WRAP73Q9P2S5 460 aaPredicted RBP14.82□□□□□ -0.04
HDAC8-210ENST00000412342 MTMR6Q9Y217 621 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 EVPLQ92817 2033 aa14.82□□□□□ -0.04
HDAC8-210ENST00000412342 LAMA3Q16787 3333 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 CAND2O75155 1236 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 OR52Z1P0C646 297 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 SELPP16109 830 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 TXKP42681 527 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 IGBP1P78318 339 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 RESTQ13127 1097 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 SHHQ15465 462 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 RILPL1Q5EBL4 403 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 ZNF484Q5JVG2 852 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 ZNF618Q5T7W0 954 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 TAF2Q6P1X5 1199 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 LRRC8DQ7L1W4 858 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 TDHQ8IZJ6 230 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 BANK1Q8NDB2 785 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 FAM167AQ96KS9 214 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 CEP89Q96ST8 783 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.81□□□□□ -0.047e-6■■□□□ 11.5
HDAC8-210ENST00000412342 PCDHA12Q9UN75 941 aa14.81□□□□□ -0.04
HDAC8-210ENST00000412342 PTPRSQ13332 1948 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 LOXHD1Q8IVV2 1947 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 VPS37CA5D8V6 355 aaPredicted RBP14.8□□□□□ -0.04
HDAC8-210ENST00000412342 POTEMA6NI47 508 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 MARCH6O60337 910 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 NBNO60934 754 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 C22orf31O95567 290 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 ACRP10323 421 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 RFC2P35250 354 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 PSMC5P62195 406 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 MGAT3Q09327 533 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 TARBP2Q15633 366 aaKnown RBP14.8□□□□□ -0.04
HDAC8-210ENST00000412342 HABP4Q5JVS0 413 aaKnown RBP14.8□□□□□ -0.04
HDAC8-210ENST00000412342 FAM26DQ5JW98 314 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 TMEM240Q5SV17 173 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 RASIP1Q5U651 963 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 NCAPH2Q6IBW4 605 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 MTHFD1LQ6UB35 978 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 BRAPQ7Z569 592 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 FERMT3Q86UX7 667 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 LINC01465Q8N7H1 131 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 RETREG2Q8NC44 543 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 TNPO1Q92973 898 aaKnown RBP14.8□□□□□ -0.04
HDAC8-210ENST00000412342 HSD17B14Q9BPX1 270 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 NIFKQ9BYG3 293 aaKnown RBP14.8□□□□□ -0.04
HDAC8-210ENST00000412342 OSBPL7Q9BZF2 842 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 RGL1Q9NZL6 768 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 PCDHA2Q9Y5H9 948 aa14.8□□□□□ -0.04
HDAC8-210ENST00000412342 SMIM35A0A1B0GVV1 85 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 TMEM150BA6NC51 233 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 SLITRK3O94933 977 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 CXCL10P02778 98 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 P4HBP07237 508 aaKnown RBP14.79□□□□□ -0.04
HDAC8-210ENST00000412342 THPOP40225 353 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 QARSP47897 775 aaKnown RBP14.79□□□□□ -0.04
HDAC8-210ENST00000412342 PTGDRQ13258 359 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 IL17AQ16552 155 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 XKR3Q5GH77 459 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 ANO5Q75V66 913 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 CKAP2LQ8IYA6 745 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 DYDC2Q96IM9 177 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 EIF2AK1Q9BQI3 630 aaKnown RBP14.79□□□□□ -0.04
HDAC8-210ENST00000412342 LXNQ9BS40 222 aa14.79□□□□□ -0.04
HDAC8-210ENST00000412342 STX6O43752 255 aa14.78□□□□□ -0.04
HDAC8-210ENST00000412342 LYPLA2O95372 231 aa14.78□□□□□ -0.04
HDAC8-210ENST00000412342 KLRC1P26715 233 aa14.78□□□□□ -0.04
HDAC8-210ENST00000412342 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
HDAC8-210ENST00000412342 ATP2C1P98194 919 aaPredicted RBP14.78□□□□□ -0.04
HDAC8-210ENST00000412342 TCTN1Q2MV58 587 aa14.78□□□□□ -0.04
HDAC8-210ENST00000412342 PSRC1Q6PGN9 363 aaPredicted RBP14.78□□□□□ -0.04
HDAC8-210ENST00000412342 ZNF365Q70YC5 407 aa14.78□□□□□ -0.04
HDAC8-210ENST00000412342 TRMT1LQ7Z2T5 733 aaKnown RBP14.78□□□□□ -0.04
HDAC8-210ENST00000412342 C4orf19Q8IY42 314 aa14.78□□□□□ -0.04
HDAC8-210ENST00000412342 DNAJB3Q8WWF6 145 aa14.78□□□□□ -0.04
HDAC8-210ENST00000412342 NRBP2Q9NSY0 501 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms