RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 HIP1RO75146 1068 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 POLD1P28340 1107 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 ZXDCQ2QGD7 858 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-205ENST00000411993 FGD2Q7Z6J4 655 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 NOSTRINQ8IVI9 506 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 IGSF22Q8N9C0 903 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 CARD11Q9BXL7 1154 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 KATNBL1Q9H079 304 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 GALNT8Q9NY28 637 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 SLC4A7Q9Y6M7 1214 aa6.99□□□□□ -1.29
HDAC9-205ENST00000411993 PLD2O14939 933 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 NPTXRO95502 500 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 CNOT4O95628 575 aaKnown RBP6.98□□□□□ -1.29
HDAC9-205ENST00000411993 MMEP08473 750 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 ZNF888P0CJ79 500 aaPredicted RBP6.98□□□□□ -1.29
HDAC9-205ENST00000411993 ZNF20P17024 532 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 ADCY8P40145 1251 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 RRADP55042 308 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 IL13RA1P78552 427 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 PUM1Q14671 1186 aaKnown RBP eCLIP6.98□□□□□ -1.29
HDAC9-205ENST00000411993 SEC23AQ15436 765 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 TMEM177Q53S58 311 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 OVCH1Q7RTY7 1134 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 GGNQ86UU5 652 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 C2orf69Q8N8R5 385 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 HIPK4Q8NE63 616 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 DVL3Q92997 716 aaPredicted RBP6.98□□□□□ -1.29
HDAC9-205ENST00000411993 PTPN18Q99952 460 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 MEGF9Q9H1U4 602 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 ZSWIM4Q9H7M6 989 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 TRIM39Q9HCM9 518 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 KCNH7Q9NS40 1196 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 UCKL1Q9NWZ5 548 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 BTBD7Q9P203 1132 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 PTPN22Q9Y2R2 807 aa6.98□□□□□ -1.29
HDAC9-205ENST00000411993 FOXP2O15409 715 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 GPR42O15529 346 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 KCNQ2O43526 872 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 RAPGEF3O95398 923 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 TOP3AQ13472 1001 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-205ENST00000411993 ICAM4Q14773 271 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 FSTL4Q6MZW2 842 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 DRC1Q96MC2 740 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 LRRC37BQ96QE4 947 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 LMF1Q96S06 567 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 SEC61A2Q9H9S3 476 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 FBXO10Q9UK96 956 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 JAG2Q9Y219 1238 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 MYRFQ9Y2G1 1151 aa6.97□□□□□ -1.29
HDAC9-205ENST00000411993 HMGCRP04035 888 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 ETV4P43268 484 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 KCNQ1P51787 676 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 IRF9Q00978 393 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 TMEM132BQ14DG7 1078 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 ABHD17CQ6PCB6 329 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 CXXC5Q7LFL8 322 aaKnown RBP6.96□□□□□ -1.3
HDAC9-205ENST00000411993 OTOP2Q7RTS6 562 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 DDX53Q86TM3 631 aaKnown RBP6.96□□□□□ -1.3
HDAC9-205ENST00000411993 ASB15Q8WXK1 588 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 BTBD2Q9BX70 525 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 KRTAP3-1Q9BYR8 98 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 DEF6Q9H4E7 631 aa6.96□□□□□ -1.3
HDAC9-205ENST00000411993 B4E1Z4 1266 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 KRT37O76014 449 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 ECE1P42892 770 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 TM4SF20Q53R12 229 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 ZMAT1Q5H9K5 638 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 LRSAM1Q6UWE0 723 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 GIMAP8Q8ND71 665 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-205ENST00000411993 SH3TC2Q8TF17 1288 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 UBXN4Q92575 508 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 WNK4Q96J92 1243 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 SCYL1Q96KG9 808 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 GBP4Q96PP9 640 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 C1QTNF3Q9BXJ4 246 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 AMNQ9BXJ7 453 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 ZDHHC5Q9C0B5 715 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 TCAF1Q9Y4C2 921 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 B3GALT1Q9Y5Z6 326 aa6.95□□□□□ -1.3
HDAC9-205ENST00000411993 PRAMEF22A3QJZ6 481 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 OPA1O60313 960 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 MPIG6BO95866 241 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 KCNA6P17658 529 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 IGFALSP35858 605 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 RAC3P60763 192 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 STILQ15468 1287 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 FNDC3BQ53EP0 1204 aaKnown RBP6.94□□□□□ -1.3
HDAC9-205ENST00000411993 ZNF585AQ6P3V2 769 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 DLG3Q92796 817 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 ERCC4Q92889 916 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-205ENST00000411993 NEIL1Q96FI4 390 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-205ENST00000411993 CDK5RAP1Q96SZ6 601 aaKnown RBP6.94□□□□□ -1.3
HDAC9-205ENST00000411993 BOCQ9BWV1 1114 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 KLC2Q9H0B6 622 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 OR10A5Q9H207 317 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 ASB1Q9Y576 335 aa6.94□□□□□ -1.3
HDAC9-205ENST00000411993 M0R2C6 588 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 SDHAP31040 664 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 CD83Q01151 205 aa6.93□□□□□ -1.3
HDAC9-205ENST00000411993 SQSTM1Q13501 440 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms