RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 EIF2AK1Q9BQI3 630 aaKnown RBP16.6■□□□□ 0.25
SUMO1-207ENST00000409498 NIFKQ9BYG3 293 aaKnown RBP16.6■□□□□ 0.25
SUMO1-207ENST00000409498 NRBP2Q9NSY0 501 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 SETD4Q9NVD3 440 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 ZDHHC9Q9Y397 364 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 STK24Q9Y6E0 443 aa16.6■□□□□ 0.25
SUMO1-207ENST00000409498 POTEMA6NI47 508 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 ZBTB42B2RXF5 422 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 PITPNM1O00562 1244 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 TREHO43280 583 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 TIMP1P01033 207 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 OATP04181 439 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 MUTP22033 750 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 CHMP4BP1P59074 171 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 ZNF200P98182 395 aaPredicted RBP16.59■□□□□ 0.25
SUMO1-207ENST00000409498 TARBP2Q15633 366 aaKnown RBP16.59■□□□□ 0.25
SUMO1-207ENST00000409498 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
SUMO1-207ENST00000409498 XKR3Q5GH77 459 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 ATL3Q6DD88 541 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 FAM173BQ6P4H8 233 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 DTHD1Q6ZMT9 781 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 CAGE1Q8TC20 777 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 DHX38Q92620 1227 aaKnown RBP16.59■□□□□ 0.25
SUMO1-207ENST00000409498 CEP89Q96ST8 783 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 POLR3CQ9BUI4 534 aaPredicted RBP16.59■□□□□ 0.25
SUMO1-207ENST00000409498 NOC4LQ9BVI4 516 aaKnown RBP16.59■□□□□ 0.25
SUMO1-207ENST00000409498 RAB34Q9BZG1 259 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 ZSWIM4Q9H7M6 989 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 LTBP2Q14767 1821 aa16.59■□□□□ 0.25
SUMO1-207ENST00000409498 PDE4DIPQ5VU43 2346 aa16.58■□□□□ 0.25
SUMO1-207ENST00000409498 DNAH12Q6ZR08 3092 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 CAND2O75155 1236 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 RPLP2P05387 115 aaKnown RBP16.58■□□□□ 0.24
SUMO1-207ENST00000409498 SPATA31C1P0DKV0 1188 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 XRCC6P12956 609 aaKnown RBP eCLIP16.58■□□□□ 0.24
SUMO1-207ENST00000409498 ITGB8P26012 769 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 RPA1P27694 616 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 NASPP49321 788 aaPredicted RBP16.58■□□□□ 0.24
SUMO1-207ENST00000409498 PRKCEQ02156 737 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 TAF2Q6P1X5 1199 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 BANK1Q8NDB2 785 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 DYDC2Q96IM9 177 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 USP28Q96RU2 1077 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 LXNQ9BS40 222 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 TUFT1Q9NNX1 390 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 RGL1Q9NZL6 768 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 WRAP73Q9P2S5 460 aaPredicted RBP16.58■□□□□ 0.24
SUMO1-207ENST00000409498 PRKAG2Q9UGJ0 569 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 TRPC6Q9Y210 931 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 PPME1Q9Y570 386 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 PCDHA2Q9Y5H9 948 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 CLIC4Q9Y696 253 aa16.58■□□□□ 0.24
SUMO1-207ENST00000409498 TNRC18O15417 2968 aaPredicted RBP16.57■□□□□ 0.24
SUMO1-207ENST00000409498 H0YGN5 161 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 CYP2C9P11712 490 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 BFSP2Q13515 415 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 ANO5Q75V66 913 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 CKAP2LQ8IYA6 745 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 CCDC155Q8N6L0 562 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 ERMNQ8TAM6 284 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 AK8Q96MA6 479 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 ZNF396Q96N95 335 aaPredicted RBP16.57■□□□□ 0.24
SUMO1-207ENST00000409498 LRWD1Q9UFC0 647 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 TUBE1Q9UJT0 475 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 NOD1Q9Y239 953 aa16.57■□□□□ 0.24
SUMO1-207ENST00000409498 SMIM35A0A1B0GVV1 85 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 MAGEB2O15479 319 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 SLC26A4O43511 780 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 RAG1P15918 1043 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 ANP32AP39687 249 aaKnown RBP16.56■□□□□ 0.24
SUMO1-207ENST00000409498 CTTNQ14247 550 aaKnown RBP16.56■□□□□ 0.24
SUMO1-207ENST00000409498 SLC39A14Q15043 492 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 HAUS3Q68CZ6 603 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 MFSD5Q6N075 450 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 MTHFD1LQ6UB35 978 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 KCTD17Q8N5Z5 321 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 LINC01465Q8N7H1 131 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 WNT8BQ93098 351 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 HIPK3Q9H422 1215 aa16.56■□□□□ 0.24
SUMO1-207ENST00000409498 PRDM5Q9NQX1 630 aaPredicted RBP16.56■□□□□ 0.24
SUMO1-207ENST00000409498 ZMYND8Q9ULU4 1186 aaPredicted RBP16.56■□□□□ 0.24
SUMO1-207ENST00000409498 IGKV6-21A0A0C4DH24 114 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 MED24O75448 989 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 PARNO95453 639 aaKnown RBP16.55■□□□□ 0.24
SUMO1-207ENST00000409498 C22orf31O95567 290 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 YEATS4O95619 227 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 SYN1P17600 705 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 KLRC1P26715 233 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 NUCB2P80303 420 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 FAM26DQ5JW98 314 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 HYIQ5T013 277 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 TRAF7Q6Q0C0 670 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 OTUD6AQ7L8S5 288 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 TPH2Q8IWU9 490 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 LINC00301Q8NCQ3 95 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 GDF15Q99988 308 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 FTOQ9C0B1 505 aaKnown RBP eCLIP16.55■□□□□ 0.24
SUMO1-207ENST00000409498 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
SUMO1-207ENST00000409498 SRPRBQ9Y5M8 271 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms