RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 TMED8Q6PL24 325 aaPredicted RBP17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 RBM43Q6ZSC3 357 aaKnown RBP17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 HPSEQ9Y251 543 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 DYNLT1P63172 113 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 SEC23AQ15436 765 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 SCARA5Q6ZMJ2 495 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 RNF207Q6ZRF8 634 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 CAPN11Q9UMQ6 739 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 SYNJ2BP-COX16A0A087WUM0 186 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 MKRN3Q13064 507 aaKnown RBP17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 EIF2AK1Q9BQI3 630 aaKnown RBP17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 DDX47Q9H0S4 455 aaKnown RBP17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 COX16Q9P0S2 106 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 MAD2L2Q9UI95 211 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 FAM205AQ6ZU69 1335 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 IPO5O00410 1097 aaKnown RBP17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 HNRNPH2P55795 449 aaKnown RBP17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 NFIAQ12857 509 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 KCNB1Q14721 858 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 C6orf163Q5TEZ5 329 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 C16orf86Q6ZW13 317 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 GLYCTKQ8IVS8 523 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 OSBPL9Q96SU4 736 aa17.87■□□□□ 0.45
PTPRN2-205ENST00000409483 SAAL1Q96ER3 474 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 TMEM206Q9H813 350 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 TBK1Q9UHD2 729 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 FEZ2Q9UHY8 353 aaPredicted RBP17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 POC1B-GALNT4F8VUJ3 575 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 RSAD2Q8WXG1 361 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 TRIM7Q9C029 511 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 FAM217BQ9NTX9 383 aaPredicted RBP17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 ZKSCAN8Q15776 578 aaPredicted RBP17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 ZNF710Q8N1W2 664 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 LXNQ9BS40 222 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 JMJD4Q9H9V9 463 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 RHOBTB3O94955 611 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 IFT88Q13099 833 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 VPS72Q15906 364 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 SGO2Q562F6 1265 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 FAM160B2Q86V87 743 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 BAIAP2L1Q9UHR4 511 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 ANAPC4Q9UJX5 808 aa17.86■□□□□ 0.45
PTPRN2-205ENST00000409483 PRELPP51888 382 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 NCAPHQ15003 741 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 RC3H1Q5TC82 1133 aaKnown RBP17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 PPM1EQ8WY54 764 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 MS4A14Q96JA4 679 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 ZHX2Q9Y6X8 837 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 SLC37A4O43826 429 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 ATF2P15336 505 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 GGCXP38435 758 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 ZNF131P52739 623 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 PKN1Q16512 942 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 PPP4R3CPQ6ZMV5 832 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 PASD1Q8IV76 773 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 PROM2Q8N271 834 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 FAM20AQ96MK3 541 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 NRBP2Q9NSY0 501 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 TNNC2P02585 160 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 ALDH3A1P30838 453 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 SLC8A3P57103 927 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 NYAP1Q6ZVC0 841 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 PARP2Q9UGN5 583 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 NOVA2Q9UNW9 492 aaKnown RBP17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 STK38LQ9Y2H1 464 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 SNX24Q9Y343 169 aa17.85■□□□□ 0.45
PTPRN2-205ENST00000409483 BFSP1Q12934 665 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 PDCLQ13371 301 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 CACNA2D3Q8IZS8 1091 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 SMC6Q96SB8 1091 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 GOLPH3Q9H4A6 298 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 A0A1W2PQC6 194 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 SSTR3P32745 418 aaPredicted RBP17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 MAP3K9P80192 1104 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 EVX2Q03828 476 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 DRAP1Q14919 205 aaPredicted RBP17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 BRDTQ58F21 947 aaPredicted RBP17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 CCDC13Q8IYE1 715 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 ZMYND12Q9H0C1 365 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 POLLQ9UGP5 575 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 NOD1Q9Y239 953 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 PASKQ96RG2 1323 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 EIF3CLB5ME19 914 aaKnown RBP17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 PLEKP08567 350 aaPredicted RBP17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 VEGFAP15692 232 aaPredicted RBP17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 EN1Q05925 392 aaPredicted RBP17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 Q3C1V9 767 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 EIF3CQ99613 913 aaKnown RBP17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 PLEKHG2Q9H7P9 1386 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 STAM2O75886 525 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 GIMAP8Q8ND71 665 aaPredicted RBP17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 CEP63Q96MT8 703 aa17.84■□□□□ 0.45
PTPRN2-205ENST00000409483 A6NNZ2 444 aa17.83■□□□□ 0.45
PTPRN2-205ENST00000409483 TUBB8Q3ZCM7 444 aa17.83■□□□□ 0.45
PTPRN2-205ENST00000409483 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.83■□□□□ 0.45
PTPRN2-205ENST00000409483 NOA1Q8NC60 698 aaKnown RBP17.83■□□□□ 0.45
PTPRN2-205ENST00000409483 HAUS1Q96CS2 278 aa17.83■□□□□ 0.45
PTPRN2-205ENST00000409483 WRNIP1Q96S55 665 aa17.83■□□□□ 0.45
PTPRN2-205ENST00000409483 PLCB1Q9NQ66 1216 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms