RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 CCDC60Q8IWA6 550 aaPredicted RBP15.6■□□□□ 0.09
GPNMB-203ENST00000409458 MYOCDQ8IZQ8 938 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 ABRAQ8N0Z2 381 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 SMC1BQ8NDV3 1235 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 KCND2Q9NZV8 630 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 NRBP1Q9UHY1 535 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 CPA4Q9UI42 421 aa15.6■□□□□ 0.09
GPNMB-203ENST00000409458 LOC102724159A0A0B4J2E5 919 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 GOLGA6L6A8MZA4 724 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 BACH1O14867 736 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 FARP2O94887 1054 aaPredicted RBP15.59■□□□□ 0.09
GPNMB-203ENST00000409458 SUPT20HL2P0C7V6 817 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 GUCY2CP25092 1073 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 PWP2Q15269 919 aaKnown RBP15.59■□□□□ 0.09
GPNMB-203ENST00000409458 UTP14CQ5TAP6 766 aaKnown RBP15.59■□□□□ 0.09
GPNMB-203ENST00000409458 CENPPQ6IPU0 288 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 PADI6Q6TGC4 694 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 IRF2BP1Q8IU81 584 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 SCFD1Q8WVM8 642 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 SH2D3AQ9BRG2 576 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 ZCCHC17Q9NP64 241 aaKnown RBP15.59■□□□□ 0.09
GPNMB-203ENST00000409458 ABT1Q9ULW3 272 aaKnown RBP15.59■□□□□ 0.09
GPNMB-203ENST00000409458 COL4A3BPQ9Y5P4 624 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 IVNS1ABPQ9Y6Y0 642 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 MYH11P35749 1972 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 SYNGAP1Q96PV0 1343 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 IGSF9BQ9UPX0 1349 aa15.59■□□□□ 0.09
GPNMB-203ENST00000409458 SFI1A8K8P3 1242 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 KCNJ18B7U540 433 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 ZNF862O60290 1169 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 FAM13AO94988 1023 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 GAP43P17677 238 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 GRB14Q14449 540 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 KCNJ12Q14500 433 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 TAF1CQ15572 869 aaPredicted RBP15.58■□□□□ 0.08
GPNMB-203ENST00000409458 PTPN21Q16825 1174 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 LY6KQ17RY6 165 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 SWSAP1Q6NVH7 229 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 MIS18BP1Q6P0N0 1132 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 ARMCX2Q7L311 632 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 IFNL1Q8IU54 200 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 CSGALNACT2Q8N6G5 542 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 ATP6V0A1Q93050 837 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 THAP9Q9H5L6 903 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 ODF2LQ9ULJ1 636 aa15.58■□□□□ 0.08
GPNMB-203ENST00000409458 A0A1B0GTH6 734 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 ASB14A6NK59 587 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 STRNO43815 780 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 USO1O60763 962 aaKnown RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 HIP1RO75146 1068 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 STBD1O95210 358 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 ATG7O95352 703 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 GGPS1O95749 300 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 MYBP10242 640 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 TGFB3P10600 412 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 PTGS1P23219 599 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 ZNF131P52739 623 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 MAPK7Q13164 816 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 NEDD9Q14511 834 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 KRT31Q15323 416 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 TCP11X2Q5H9J9 407 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 ANO5Q75V66 913 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 EPM2AIP1Q7L775 607 aaPredicted RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 TRMT1LQ7Z2T5 733 aaKnown RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 TMC6Q7Z403 805 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 PLEKHH3Q7Z736 793 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 NOC3LQ8WTT2 800 aaKnown RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 CCDC43Q96MW1 224 aaKnown RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 ZNF830Q96NB3 372 aaPredicted RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 SRRTQ9BXP5 876 aaKnown RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 ANKEF1Q9NU02 776 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 LIMA1Q9UHB6 759 aaKnown RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 DDX41Q9UJV9 622 aaKnown RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 MYH9P35579 1960 aaKnown RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 MAPK4P31152 587 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 NPEPPSP55786 919 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 PRKCEQ02156 737 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 SPAG1Q07617 926 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 ZCWPW2Q504Y3 356 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 METTL7BQ6UX53 244 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 CCDC186Q7Z3E2 898 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 NELFCDQ8IXH7 590 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 DAW1Q8N136 415 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 MYCT1Q8N699 235 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 EEF2KMTQ96G04 330 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 FIZ1Q96SL8 496 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 MRPL44Q9H9J2 332 aaKnown RBP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 PARVGQ9HBI0 331 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 OLFML3Q9NRN5 406 aa15.57■□□□□ 0.08
GPNMB-203ENST00000409458 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.57■□□□□ 0.08
GPNMB-203ENST00000409458 GSTTP1A0A1W2PQM5 241 aa15.56■□□□□ 0.08
GPNMB-203ENST00000409458 LRRC63Q05C16 580 aa15.56■□□□□ 0.08
GPNMB-203ENST00000409458 NR1I3Q14994 352 aa15.56■□□□□ 0.08
GPNMB-203ENST00000409458 XKR9Q5GH70 373 aa15.56■□□□□ 0.08
GPNMB-203ENST00000409458 KCNV1Q6PIU1 500 aa15.56■□□□□ 0.08
GPNMB-203ENST00000409458 MAEAQ7L5Y9 396 aa15.56■□□□□ 0.08
GPNMB-203ENST00000409458 FILIP1Q7Z7B0 1213 aa15.56■□□□□ 0.08
GPNMB-203ENST00000409458 VSTM4Q8IW00 320 aa15.56■□□□□ 0.08
GPNMB-203ENST00000409458 KCTD10Q9H3F6 313 aa15.56■□□□□ 0.08
GPNMB-203ENST00000409458 KCNF1Q9H3M0 494 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms