RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 KRT3P12035 628 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 ERICH1Q86X53 443 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 CRAMP1Q96RY5 1269 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 ECEL1O95672 775 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 THOC5Q13769 683 aaKnown RBP27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 UNC13DQ70J99 1090 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 CYB5R4Q7L1T6 521 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 CHAMP1Q96JM3 812 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 POLIQ9UNA4 740 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 NMT2O60551 498 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 PSPC1Q8WXF1 523 aaKnown RBP27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 FAM84BQ96KN1 310 aaPredicted RBP27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 RFX7Q2KHR2 1363 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 CASQ2O14958 399 aaPredicted RBP27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 SNX1Q13596 522 aa27.04■■□□□ 1.92
SPIRE1-202ENST00000409402 FAM71BQ8TC56 605 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 EFCC1Q9HA90 598 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 POC1B-GALNT4F8VUJ3 575 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 ZNF568Q3ZCX4 644 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 MAP3K21Q5TCX8 1036 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 C2orf40Q9H1Z8 148 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 NFKBIAP25963 317 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 STAT3P40763 770 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 CCHCR1Q8TD31 782 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 DAAM1Q9Y4D1 1078 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 USP31Q70CQ4 1352 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 ALX1Q15699 326 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 LRRD1A4D1F6 860 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 PGRMC1O00264 195 aaKnown RBP27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 SLC35F6Q8N357 371 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 CPVLQ9H3G5 476 aa27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 SAMSN1Q9NSI8 373 aaKnown RBP27.03■■□□□ 1.92
SPIRE1-202ENST00000409402 LMNTD2Q8IXW0 634 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 ASB14A6NK59 587 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 ORC2Q13416 577 aaPredicted RBP27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 NOP9Q86U38 636 aaKnown RBP27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 PNMA8AQ86V59 439 aaPredicted RBP27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 CCDC170Q8IYT3 715 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 SCINQ9Y6U3 715 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 TSPY1Q01534 308 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 SLFNL1Q499Z3 407 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 C1orf228Q6PIY5 440 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 PHLDB2Q86SQ0 1253 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 BEST2Q8NFU1 509 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 DYDC2Q96IM9 177 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 POTEMA6NI47 508 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 HSPA6P17066 643 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 TSNAXIP1Q2TAA8 658 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 ATP6V1E2Q96A05 226 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 SPZ1Q9BXG8 430 aa27.02■■□□□ 1.92
SPIRE1-202ENST00000409402 HUS1O60921 280 aa27.01■■□□□ 1.92
SPIRE1-202ENST00000409402 GTF2A1P52655 376 aaPredicted RBP27.01■■□□□ 1.92
SPIRE1-202ENST00000409402 SPATA33Q96N06 139 aa27.01■■□□□ 1.92
SPIRE1-202ENST00000409402 F8W8V4 182 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 ZNF18P17022 549 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 APBA1Q02410 837 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 NKX1-1Q15270 411 aaPredicted RBP27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 SH2D4BQ5SQS7 431 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 P4HBP07237 508 aaKnown RBP27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 EIF4A3P38919 411 aaKnown RBP27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 ADGRF4Q8IZF3 695 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 RPAP3Q9H6T3 665 aaPredicted RBP27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 IQCB1Q15051 598 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 JADE1Q6IE81 842 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 MICALL2Q8IY33 904 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 MCUQ8NE86 351 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 GANCQ8TET4 914 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 GPC4O75487 556 aa27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 NHEJ1Q9H9Q4 299 aaPredicted RBP27.01■■□□□ 1.91
SPIRE1-202ENST00000409402 ENC1O14682 589 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 BASP1P80723 227 aaKnown RBP27■■□□□ 1.91
SPIRE1-202ENST00000409402 IGSF3O75054 1194 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 QRICH1Q2TAL8 776 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 SWSAP1Q6NVH7 229 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 LRRC8CQ8TDW0 803 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 PBKQ96KB5 322 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 PPP1R13BQ96KQ4 1090 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 CDC23Q9UJX2 597 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 NRKQ7Z2Y5 1582 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 ARHGAP42A6NI28 874 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 TRIM28Q13263 835 aaKnown RBP27■■□□□ 1.91
SPIRE1-202ENST00000409402 BZW1Q7L1Q6 419 aaKnown RBP27■■□□□ 1.91
SPIRE1-202ENST00000409402 RAD54LQ92698 747 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 A0A0G2JLW4 131 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 QARSP47897 775 aaKnown RBP27■■□□□ 1.91
SPIRE1-202ENST00000409402 FOXO4P98177 505 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 TCP11X2Q5H9J9 407 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 RESP18Q5W5W9 173 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 NDUFAF2Q8N183 169 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 DONSONQ9NYP3 566 aa27■■□□□ 1.91
SPIRE1-202ENST00000409402 GPC3P51654 580 aa26.99■■□□□ 1.91
SPIRE1-202ENST00000409402 SFR1Q86XK3 245 aa26.99■■□□□ 1.91
SPIRE1-202ENST00000409402 TBC1D16Q8TBP0 767 aa26.99■■□□□ 1.91
SPIRE1-202ENST00000409402 GABBR1Q9UBS5 961 aa26.99■■□□□ 1.91
SPIRE1-202ENST00000409402 RNF17Q9BXT8 1623 aaKnown RBP26.99■■□□□ 1.91
SPIRE1-202ENST00000409402 RHPN2Q8IUC4 686 aa26.99■■□□□ 1.91
SPIRE1-202ENST00000409402 MXD3Q9BW11 206 aa26.99■■□□□ 1.91
SPIRE1-202ENST00000409402 LY9Q9HBG7 655 aa26.99■■□□□ 1.91
SPIRE1-202ENST00000409402 C1orf167Q5SNV9 1468 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms