RNA–Protein interactions for RNA: ENST00000409229.7

SLC3A1-202, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,909 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-202ENST00000409229 LIN52Q52LA3 116 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 SPATA24Q86W54 205 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 RIBC1Q8N443 379 aaPredicted RBP12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 GDAP1Q8TB36 358 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 TBC1D16Q8TBP0 767 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 DTX3LQ8TDB6 740 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 NCSTNQ92542 709 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 MPP4Q96JB8 637 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 HAPLN3Q96S86 360 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 ARPC5LQ9BPX5 153 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 CENPKQ9BS16 269 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 FAM114A2Q9NRY5 505 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 USP20Q9Y2K6 914 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 POGZQ7Z3K3 1410 aa12.61□□□□□ -0.39
SLC3A1-202ENST00000409229 SIGLEC16A6NMB1 481 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 CCDC169A6NNP5 214 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 OXCT1P55809 520 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 RCN1Q15293 331 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 KHDC1Q4VXA5 237 aaKnown RBP12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 CFAP157Q5JU67 520 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 OTUD6AQ7L8S5 288 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 SLC15A3Q8IY34 581 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 CMTR1Q8N1G2 835 aaKnown RBP12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 AGGF1Q8N302 714 aaeCLIP12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 KCNN1Q92952 543 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 OSBP2Q969R2 916 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 NR1H4Q96RI1 486 aaPredicted RBP12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 NOC4LQ9BVI4 516 aaKnown RBP12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 TBC1D10AQ9BXI6 508 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 GOLPH3Q9H4A6 298 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 DCLRE1BQ9H816 532 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 MMRN2Q9H8L6 949 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 DBR1Q9UK59 544 aaKnown RBP12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 PLAGL2Q9UPG8 496 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 CACNA1FO60840 1977 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 TRIM75PA6NK02 468 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 BOLA2-SMG1P6H3BVE0 249 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 ZNF213O14771 459 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 EPHB6O15197 1021 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 GJB6O95452 261 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 RPN1P04843 607 aaKnown RBP12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 LYNP07948 512 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 HOXD12P35452 270 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 GALK1P51570 392 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 CDK17Q00537 523 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 MGAT5Q09328 741 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 PARP6Q2NL67 630 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 PROSER3Q2NL68 480 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 DENND2CQ68D51 928 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 TRIM50Q86XT4 487 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 CSGALNACT2Q8N6G5 542 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 EIF1ADQ8N9N8 165 aaKnown RBP12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 NKX2-3Q8TAU0 364 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 NRG4Q8WWG1 115 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 ERP27Q96DN0 273 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 DHRS1Q96LJ7 313 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 FMO2Q99518 471 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 CIDEBQ9UHD4 219 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 RIMS1Q86UR5 1692 aaKnown RBP12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 CPS1P31327 1500 aa12.6□□□□□ -0.39
SLC3A1-202ENST00000409229 O00370 1275 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 RNF113AO15541 343 aaKnown RBP12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 PYGMP11217 842 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 GNAT2P19087 354 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 ADARP55265 1226 aaKnown RBP12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 ECHDC2Q86YB7 292 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 EYA1Q99502 592 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 MYLK2Q9H1R3 596 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 PFDN4Q9NQP4 134 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 INIPQ9NRY2 104 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 KRIT1O00522 736 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 ITGA4P13612 1032 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 VARSP26640 1264 aaKnown RBP12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 HPCAP84074 193 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 CCDC152Q4G0S7 254 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 HS2ST1Q7LGA3 356 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 ANKLE1Q8NAG6 615 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 PPFIBP2Q8ND30 876 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 EPS8L3Q8TE67 593 aaKnown RBP12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 DHTKD1Q96HY7 919 aaPredicted RBP12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 TUBGCP5Q96RT8 1024 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 MIS12Q9H081 205 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 ZMYND12Q9H0C1 365 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 LRMDAQ9H2I8 198 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 CCDC134Q9H6E4 229 aa12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 R3HDM2Q9Y2K5 976 aaKnown RBP12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 TDRKHQ9Y2W6 561 aaKnown RBP12.59□□□□□ -0.39
SLC3A1-202ENST00000409229 LRRC53A6NM62 1247 aa12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 RPS6KA1Q15418 735 aa12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 NTRK3Q16288 839 aa12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 KSR2Q6VAB6 950 aa12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 PGM2Q96G03 612 aa12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 ABHD8Q96I13 439 aa12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 AGAP3Q96P47 875 aa12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 TRIM51Q9BSJ1 452 aa12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 KCNK9Q9NPC2 374 aa12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 NLRC4Q9NPP4 1024 aa12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 LARSQ9P2J5 1176 aaKnown RBP12.58□□□□□ -0.39
SLC3A1-202ENST00000409229 STK36Q9NRP7 1315 aa12.58□□□□□ -0.4
SLC3A1-202ENST00000409229 CAPN9O14815 690 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms