RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 PRELPP51888 382 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 JAK3P52333 1124 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 RASSF7Q02833 373 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 IFRD2Q12894 506 aaPredicted RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 PSMD2Q13200 908 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 NCAPHQ15003 741 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 STOX1Q6ZVD7 989 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SLC10A4Q96EP9 437 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 CDHR1Q96JP9 859 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 FAM193BQ96PV7 902 aaPredicted RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 MXD3Q9BW11 206 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 RIC8AQ9NPQ8 531 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SAMSN1Q9NSI8 373 aaKnown RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 RNF181Q9P0P0 153 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 ZHX2Q9Y6X8 837 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 FLT1P17948 1338 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 POTEMA6NI47 508 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 UBE2Q2LH0YL09 131 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 NDC80O14777 642 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 HOXA7P31268 230 aaPredicted RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 GABPAQ06546 454 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 PAK2Q13177 524 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 TRIM28Q13263 835 aaKnown RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 MTMR1Q13613 665 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 Q3C1V9 767 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 TCP11X2Q5H9J9 407 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SNRNP48Q6IEG0 339 aaKnown RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SCYL2Q6P3W7 929 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 INTS5Q6P9B9 1019 aaKnown RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 EXOC8Q8IYI6 725 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 ZNF512BQ96KM6 892 aaPredicted RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 PARVGQ9HBI0 331 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 GCNT4Q9P109 453 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SAMD15Q9P1V8 674 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 PARP2Q9UGN5 583 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 CD2APQ9Y5K6 639 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 C3P01024 1663 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 AKR1B1P15121 316 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 LMNB1P20700 586 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 CDC25CP30307 473 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 ITIH3Q06033 890 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 NKX1-1Q15270 411 aaPredicted RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SF3B3Q15393 1217 aaKnown RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 MAN2A1Q16706 1144 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SHROOM1Q2M3G4 852 aaPredicted RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 CFAP157Q5JU67 520 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 CCDC121Q6ZUS5 278 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SHKBP1Q8TBC3 707 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 GRK7Q8WTQ7 553 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 RSAD2Q8WXG1 361 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 NT5C1BQ96P26 610 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 L2HGDHQ9H9P8 463 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 EMILIN3Q9NT22 766 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 BARHL2Q9NY43 387 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 NKIRAS1Q9NYS0 192 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 LMCD1Q9NZU5 365 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 DAGLAQ9Y4D2 1042 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 PKD1L3Q7Z443 1732 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SOWAHDA6NJG2 315 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 USP17L15C9J2P7 530 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 USP17L13C9JLJ4 530 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 USP17L11C9JVI0 530 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 USP17L18D6R9N7 530 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 USP17L22D6RA61 530 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 USP17L17D6RBQ6 530 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 USP17L19D6RCP7 530 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 USP17L20D6RJB6 530 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 KRIT1O00522 736 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 ABCD1P33897 745 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 NSFP46459 744 aaKnown RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 LACTBP83111 547 aaPredicted RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 USP17L24Q0WX57 530 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 USP17L6PQ6QN14 398 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SND1Q7KZF4 910 aaKnown RBP eCLIP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 STAG2Q8N3U4 1231 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 FAM133AQ8N9E0 248 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 GIMAP7Q8NHV1 300 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 NSMCE1Q8WV22 266 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 EGLN2Q96KS0 407 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 JPH2Q9BR39 696 aaPredicted RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 RIOK1Q9BRS2 568 aaKnown RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 PDGFDQ9GZP0 370 aaPredicted RBP4.12□□□□□ -1.75
RGPD4-201ENST00000408999 SEPT10Q9P0V9 454 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 PNMA3Q9UL41 463 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 FAM184BQ9ULE4 1060 aa4.12□□□□□ -1.75
RGPD4-201ENST00000408999 PSDA5PKW4 1024 aaPredicted RBP4.11□□□□□ -1.75
RGPD4-201ENST00000408999 GOLGA6BA6NDN3 693 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 INO80B-WBP1J3KQ70 363 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 STAT3P40763 770 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 RFX5P48382 616 aaPredicted RBP4.11□□□□□ -1.75
RGPD4-201ENST00000408999 GUCY2FP51841 1108 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 MTMR3Q13615 1198 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 HADHQ16836 314 aaKnown RBP4.11□□□□□ -1.75
RGPD4-201ENST00000408999 CPLX4Q7Z7G2 160 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 RSPH3Q86UC2 560 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 TRIM50Q86XT4 487 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 RPS6KC1Q96S38 1066 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 FUT8Q9BYC5 575 aa4.11□□□□□ -1.75
RGPD4-201ENST00000408999 INO80BQ9C086 356 aaPredicted RBP4.11□□□□□ -1.75
RGPD4-201ENST00000408999 RAB17Q9H0T7 212 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms