RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 ZBED3Q96IU2 234 aaPredicted RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 EAF1Q96JC9 268 aaPredicted RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 COX4I2Q96KJ9 171 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 HEXIM2Q96MH2 286 aaKnown RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 NT5C1BQ96P26 610 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PNMA5Q96PV4 448 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FAM193BQ96PV7 902 aaPredicted RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SPRR2FQ96RM1 72 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 NAP1L3Q99457 506 aaPredicted RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ELF4Q99607 663 aaPredicted RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FAM126AQ9BYI3 521 aaPredicted RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TRIM54Q9BYV2 358 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 BCO2Q9BYV7 579 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FOXQ1Q9C009 403 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TINAGL1Q9GZM7 467 aaPredicted RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 RNF39Q9H2S5 420 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 NSUN3Q9H649 340 aaKnown RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 REEP1Q9H902 201 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MSL2Q9HCI7 577 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 EMILIN3Q9NT22 766 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TCP11L1Q9NUJ3 509 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TMEM39AQ9NV64 488 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 HCN3Q9P1Z3 774 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 LIMD1Q9UGP4 676 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CPA4Q9UI42 421 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CTNNA3Q9UI47 895 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 RPUSD1Q9UJJ7 312 aaKnown RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PPM1HQ9ULR3 514 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 APOBEC2Q9Y235 224 aaKnown RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 OSGIN2Q9Y236 505 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SLC5A6Q9Y289 635 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PCDHB9Q9Y5E1 797 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PCDHGB1Q9Y5G3 927 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ACTL7AQ9Y615 435 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 U3KQK5 164 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 LOC285556D6RIA3 1793 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 RIC1Q4ADV7 1423 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ANKRD50Q9ULJ7 1429 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CFAP65Q6ZU64 1925 aaKnown RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 DUOX1Q9NRD9 1551 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CEP152O94986 1710 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PRDM2Q13029 1718 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PLXNA4Q9HCM2 1894 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 LRPPRCP42704 1394 aaKnown RBP0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 RFX7Q2KHR2 1363 aa0.18□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SCN10AQ9Y5Y9 1956 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PIK3C2BO00750 1634 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 GREB1LQ9C091 1923 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PLXNB3Q9ULL4 1909 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FLGP20930 4061 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TTLL8A6PVC2 850 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MEI4A8MW99 385 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 WASH4PA8MWX3 477 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FHAD1B1AJZ9 1412 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 KIF28PB7ZC32 967 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 E9PAM4 449 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 H0YIN7 160 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 NRG2O14511 850 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 KIAA0355O15063 1070 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 GRM6O15303 877 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 KCNN4O15554 427 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TREHO43280 583 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FRS3O43559 492 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 BRINP1O60477 761 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 DOK2O60496 412 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TLR2O60603 784 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PQBP1O60828 265 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ZG16O60844 167 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 RTN2O75298 545 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 DEDDO75618 318 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TJP3O95049 919 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CNOT4O95628 575 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TIMP1P01033 207 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FGAP02671 866 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MYCNP04198 464 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TMIGD3P0DMS9 266 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 COL6A2P12110 1019 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ITGB5P18084 799 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 DNASE1P24855 282 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 MZF1P28698 734 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ACTN2P35609 894 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SPAM1P38567 509 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 GRM5P41594 1212 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 KIR3DL2P43630 455 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 SLC6A11P48066 632 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 LEPRP48357 1165 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 GMPSP49915 693 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FOSBP53539 338 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 CRYBB1P53674 252 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FCGRTP55899 365 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PER3P56645 1201 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 KRTAP10-6P60371 365 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 KRTAP10-4P60372 401 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ADARB1P78563 741 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 INSM1Q01101 510 aaPredicted RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 FOLH1Q04609 750 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 TLE2Q04725 743 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 PTPN12Q05209 780 aaKnown RBP0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 ST3GAL1Q11201 340 aa0.17□□□□□ -2.38
RNU6ATAC11P-201ENST00000408541 HYAL1Q12794 435 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms