RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 FAM20AQ96MK3 541 aa11.58□□□□□ -0.56
TSPAN9-202ENST00000407263 PRO3102Q9H379 93 aa11.58□□□□□ -0.56
TSPAN9-202ENST00000407263 SEPT9Q9UHD8 586 aaPredicted RBP11.58□□□□□ -0.56
TSPAN9-202ENST00000407263 PCDHB6Q9Y5E3 794 aa11.58□□□□□ -0.56
TSPAN9-202ENST00000407263 NRCAMQ92823 1304 aa11.58□□□□□ -0.56
TSPAN9-202ENST00000407263 TCHHQ07283 1943 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 TMEM150BA6NC51 233 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 ZNF862O60290 1169 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 OATP04181 439 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 OR52Z1P0C646 297 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 GNAT1P11488 350 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 CKBP12277 381 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 ATP4AP20648 1035 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 THPOP40225 353 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 CYP4A11Q02928 519 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 SPIRE1Q08AE8 756 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 PPP2R5CQ13362 524 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 PPIGQ13427 754 aaKnown RBP eCLIP11.57□□□□□ -0.562e-6■■■□□ 17.5
TSPAN9-202ENST00000407263 TRIM71Q2Q1W2 868 aaKnown RBP11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 B3GNT9Q6UX72 402 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 SLFN12Q8IYM2 578 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 RETREG2Q8NC44 543 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 CAGE1Q8TC20 777 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 ATP8B4Q8TF62 1192 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 INTS4Q96HW7 963 aaKnown RBP11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 FAM49AQ9H0Q0 323 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 MAFBQ9Y5Q3 323 aaPredicted RBP11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 NLRC5Q86WI3 1866 aa11.57□□□□□ -0.56
TSPAN9-202ENST00000407263 COL1A2P08123 1366 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 KIAA1671Q9BY89 1806 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 SELPP16109 830 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 SYT1P21579 422 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 TRAPPC10P48553 1259 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 SLC26A2P50443 739 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 TOB1P50616 345 aaPredicted RBP11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 TMEM62Q0P6H9 643 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 MARCH8Q5T0T0 291 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 ZNF618Q5T7W0 954 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 PLA2G4FQ68DD2 849 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 TDHQ8IZJ6 230 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 RDM1Q8NG50 284 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 DYDC2Q96IM9 177 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 FAM167AQ96KS9 214 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 PPP1R16BQ96T49 567 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.56□□□□□ -0.564e-6■■■■□ 20.4
TSPAN9-202ENST00000407263 SH2D3AQ9BRG2 576 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 LXNQ9BS40 222 aa11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 TTC12Q9H892 705 aaPredicted RBP11.56□□□□□ -0.56
TSPAN9-202ENST00000407263 COL4A4P53420 1690 aaPredicted RBP11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 HBP1O60381 514 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 IQCF3P0C7M6 154 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 PDCP20941 246 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 BMP8BP34820 402 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 ADAM17P78536 824 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 CTTNQ14247 550 aaKnown RBP11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 SHHQ15465 462 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 MTERF2Q49AM1 385 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 FOXD4L5Q5VV16 416 aaPredicted RBP11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 DNAJB3Q8WWF6 145 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 FOXD4L4Q8WXT5 416 aaPredicted RBP11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 RNPC3Q96LT9 517 aaKnown RBP11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 MTMR9Q96QG7 549 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 IL23AQ9NPF7 189 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 WRAP73Q9P2S5 460 aaPredicted RBP11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 PCDHA12Q9UN75 941 aa11.55□□□□□ -0.56
TSPAN9-202ENST00000407263 MBLAC1A4D2B0 266 aaPredicted RBP11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 RRN3P2A6NIE6 340 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 ZBTB42B2RXF5 422 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 C22orf31O95567 290 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 TECP42680 631 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 PSMC5P62195 406 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 RBL2Q08999 1139 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 RESTQ13127 1097 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 PTGDRQ13258 359 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 ORC2Q13416 577 aaPredicted RBP11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 MBTPS1Q14703 1052 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 EPHA7Q15375 998 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 RILPL1Q5EBL4 403 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 HABP4Q5JVS0 413 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 PSRC1Q6PGN9 363 aaPredicted RBP11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 TRAF7Q6Q0C0 670 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 MTHFD1LQ6UB35 978 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 ZNF365Q70YC5 407 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 OTOP2Q7RTS6 562 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 LRRC71Q8N4P6 559 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 FTOQ9C0B1 505 aaKnown RBP eCLIP11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 RGL1Q9NZL6 768 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 MTMR6Q9Y217 621 aa11.54□□□□□ -0.56
TSPAN9-202ENST00000407263 ZBBXA8MT70 800 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 RSPH10B2B2RC85 870 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 STX6O43752 255 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 NBNO60934 754 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 RSPH10BP0C881 870 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 KLRC1P26715 233 aa11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 QARSP47897 775 aaKnown RBP11.53□□□□□ -0.56
TSPAN9-202ENST00000407263 CLCN3P51790 818 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms