RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 METTL14Q9HCE5 456 aaKnown RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 NLRC4Q9NPP4 1024 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 USP40Q9NVE5 1235 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 BARHL2Q9NY43 387 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 TMOD3Q9NYL9 352 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ZFATQ9P243 1243 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 KLHL14Q9P2G3 628 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ADAMTS1Q9UHI8 967 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 SALL4Q9UJQ4 1053 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 PNMA2Q9UL42 364 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 MTUS1Q9ULD2 1270 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 RPL26L1Q9UNX3 145 aaKnown RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 ATP8A1Q9Y2Q0 1164 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 TACC3Q9Y6A5 838 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 MYO5AQ9Y4I1 1855 aaKnown RBP4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 FLT1P17948 1338 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 KDM3AQ9Y4C1 1321 aa4.91□□□□□ -1.62
HDGFP1-201ENST00000405943 NUP188Q5SRE5 1749 aa4.9□□□□□ -1.62
HDGFP1-201ENST00000405943 PKD1L3Q7Z443 1732 aa4.9□□□□□ -1.62
HDGFP1-201ENST00000405943 A0A087X0T9 212 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ESYT2A0FGR8 921 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 TLDC2A0PJX2 215 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ANKRD33BA6NCL7 494 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 SPDYE3A6NKU9 549 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 MIF4GDA9UHW6 222 aaKnown RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 USP17L12C9JPN9 530 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 USP17L21D6R901 530 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 M0R2N6 131 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 IGF2BP3O00425 579 aaKnown RBP eCLIP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 RASGRF2O14827 1237 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 OPLAHO14841 1288 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 CETN3O15182 167 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 TTI1O43156 1089 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 MARCH6O60337 910 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 EVI5O60447 810 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 SNX3O60493 162 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 FAM228BP0C875 321 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 RPL13P26373 211 aaKnown RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 SMARCA1P28370 1054 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 CNGA1P29973 690 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ALDH3A1P30838 453 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 CHRNA3P32297 505 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 PCK1P35558 622 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 PEX19P40855 299 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 PRKCIP41743 596 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 TECP42680 631 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 MSH2P43246 934 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 NAPAP54920 295 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 MXRA7P84157 204 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ARID5AQ03989 594 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 KCNMA1Q12791 1236 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 BNIP1Q12981 228 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 CALCOCO2Q13137 446 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 DYNC1I2Q13409 638 aaKnown RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 MKRN4PQ13434 485 aaPredicted RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 LBRQ14739 615 aaKnown RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 CALCRLQ16602 461 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 PARP6Q2NL67 630 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 LETM2Q2VYF4 491 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ACCSLQ4AC99 568 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 SBK1Q52WX2 424 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 KIAA1755Q5JYT7 1200 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 FAM26FQ5R3K3 315 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ANKRD20A2Q5SQ80 823 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ANKRD20A1Q5TYW2 823 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ANKRD20A3Q5VUR7 823 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ALKBH5Q6P6C2 394 aaKnown RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 PPP1R21Q6ZMI0 780 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 BICDL1Q6ZP65 573 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ARHGEF18Q6ZSZ5 1173 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 INTS8Q75QN2 995 aaKnown RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 TMC4Q7Z404 712 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 SPATA21Q7Z572 469 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 FRMD5Q7Z6J6 570 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 SLFN11Q7Z7L1 901 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 LRRC34Q8IZ02 419 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 AGGF1Q8N302 714 aaeCLIP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 METTL13Q8N6R0 699 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 FAM133AQ8N9E0 248 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 LRRC57Q8N9N7 239 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 PNMA1Q8ND90 353 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 TPCN2Q8NHX9 752 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 SH3TC2Q8TF17 1288 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 AGAP11Q8TF27 550 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ZFAND2BQ8WV99 257 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 CTNNBL1Q8WYA6 563 aaPredicted RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 RAD54LQ92698 747 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 PRMT1Q99873 361 aaKnown RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 RIOK1Q9BRS2 568 aaKnown RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 MXD3Q9BW11 206 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 PLVAPQ9BX97 442 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 OSBPL1AQ9BXW6 950 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 DDX47Q9H0S4 455 aaKnown RBP4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 TMEM60Q9H2L4 133 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 DPH5Q9H2P9 285 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 POLD4Q9HCU8 107 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 ARHGEF3Q9NR81 526 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 PANK4Q9NVE7 773 aa4.9□□□□□ -1.63
HDGFP1-201ENST00000405943 SLC5A4Q9NY91 659 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms