RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 TERF2Q15554 542 aa6.81□□□□□ -1.32
HMGB3P19-201ENST00000403971 DDB1Q16531 1140 aa6.81□□□□□ -1.32
HMGB3P19-201ENST00000403971 PHF19Q5T6S3 580 aa6.81□□□□□ -1.32
HMGB3P19-201ENST00000403971 IQSEC1Q6DN90 963 aa6.81□□□□□ -1.32
HMGB3P19-201ENST00000403971 RTF1Q92541 710 aaKnown RBP6.81□□□□□ -1.32
HMGB3P19-201ENST00000403971 GBP4Q96PP9 640 aa6.81□□□□□ -1.32
HMGB3P19-201ENST00000403971 RNF38Q9H0F5 515 aa6.81□□□□□ -1.32
HMGB3P19-201ENST00000403971 BTBD7Q9P203 1132 aa6.81□□□□□ -1.32
HMGB3P19-201ENST00000403971 SYNJ1O43426 1573 aa6.81□□□□□ -1.32
HMGB3P19-201ENST00000403971 PRAMEF22A3QJZ6 481 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 N4BP3O15049 544 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 SEMA7AO75326 666 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 IGFBP6P24592 240 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 AOAHP28039 575 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 HERVK_113P62684 666 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 DLG4P78352 724 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 MTMR1Q13613 665 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 TARBP2Q15633 366 aaKnown RBP6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 BRDTQ58F21 947 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 PRAMEF18Q5VWM3 479 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 ZC3H18Q86VM9 953 aaKnown RBP6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 PASD1Q8IV76 773 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 HIPK4Q8NE63 616 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 KCNN1Q92952 543 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 C16orf92Q96LL3 132 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 NOX5Q96PH1 765 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 CCDC8Q9H0W5 538 aaPredicted RBP6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 UCKL1Q9NWZ5 548 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 ARHGAP28Q9P2N2 729 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 CUX1P39880 1505 aa6.8□□□□□ -1.32
HMGB3P19-201ENST00000403971 WASHC2CQ9Y4E1 1318 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 ETV2O00321 342 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 CYP17A1P05093 508 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 CYP2C8P10632 490 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 PFKLP17858 780 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 PFKPQ01813 784 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 MESP2Q0VG99 397 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 B3GNT8Q7Z7M8 397 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 RTN4RL1Q86UN2 441 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 CILP2Q8IUL8 1156 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 CMIPQ8IY22 773 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 CNTD1Q8N815 330 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 FOXRED1Q96CU9 486 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 ZSWIM3Q96MP5 696 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 GORASP1Q9BQQ3 440 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 SEMA4AQ9H3S1 761 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 HSPBP1Q9NZL4 362 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 FAN1Q9Y2M0 1017 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 TOPBP1Q92547 1522 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 ERCC6Q03468 1493 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 MRC2Q9UBG0 1479 aa6.79□□□□□ -1.32
HMGB3P19-201ENST00000403971 THOC2Q8NI27 1593 aaKnown RBP6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 WDR62O43379 1518 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 URB2Q14146 1524 aaKnown RBP6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 ZNF839A8K0R7 811 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 ALG1L2C9J202 215 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 GOLGA6L22H0YM25 854 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 RAB11FIP3O75154 756 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 ULK1O75385 1050 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 MPIG6BO95866 241 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 LSP1P33241 339 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 FNTBP49356 437 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 FOXO4P98177 505 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 VASNQ6EMK4 673 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 LRSAM1Q6UWE0 723 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 SYDE1Q6ZW31 735 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 NECAB2Q7Z6G3 386 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 MTMR8Q96EF0 704 aa6.78□□□□□ -1.32
HMGB3P19-201ENST00000403971 ENO2P09104 434 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 PDGFRBP09619 1106 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 PTGS1P23219 599 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 ITGA1P56199 1179 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 PHC1P78364 1004 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 ITKQ08881 620 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 ADAM9Q13443 819 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 RTP5Q14D33 572 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 EPHA7Q15375 998 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 SKIDA1Q1XH10 827 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 TMEFF1Q8IYR6 380 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 ZNF610Q8N9Z0 462 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 ZNF496Q96IT1 587 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 SCYL1Q96KG9 808 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 AMNQ9BXJ7 453 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 NGRNQ9NPE2 291 aaKnown RBP6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 TOPORSQ9NS56 1045 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 MSRAQ9UJ68 235 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 ASB1Q9Y576 335 aa6.77□□□□□ -1.33
HMGB3P19-201ENST00000403971 NFIBO00712 420 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 PLA2G1BP04054 148 aaKnown RBP6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 KRT1P04264 644 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 CD40P25942 277 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 GLRBP48167 497 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 SESN3P58005 492 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 SMAD4Q13485 552 aaKnown RBP6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 LRRC32Q14392 662 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 PDCD1Q15116 288 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 PLEKHG6Q3KR16 790 aa6.76□□□□□ -1.33
HMGB3P19-201ENST00000403971 GPR158Q5T848 1215 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms