RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 TET1Q8NFU7 2136 aa21.64■■□□□ 1.05
RTN4-207ENST00000402434 ZBTB42B2RXF5 422 aa21.64■■□□□ 1.05
RTN4-207ENST00000402434 ZNF862O60290 1169 aa21.64■■□□□ 1.05
RTN4-207ENST00000402434 NEMFO60524 1076 aa21.64■■□□□ 1.05
RTN4-207ENST00000402434 FGBP02675 491 aa21.64■■□□□ 1.05
RTN4-207ENST00000402434 TRAPPC10P48553 1259 aa21.64■■□□□ 1.05
RTN4-207ENST00000402434 SPIRE1Q08AE8 756 aa21.64■■□□□ 1.05
RTN4-207ENST00000402434 HERVK_113Q902F9 699 aa21.64■■□□□ 1.05
RTN4-207ENST00000402434 RNPC3Q96LT9 517 aaKnown RBP21.64■■□□□ 1.05
RTN4-207ENST00000402434 MTMR9Q96QG7 549 aa21.64■■□□□ 1.05
RTN4-207ENST00000402434 COL1A2P08123 1366 aa21.63■■□□□ 1.05
RTN4-207ENST00000402434 EML1O00423 815 aa21.63■■□□□ 1.05
RTN4-207ENST00000402434 BAG4O95429 457 aaKnown RBP21.63■■□□□ 1.05
RTN4-207ENST00000402434 IGBP1P78318 339 aa21.63■■□□□ 1.05
RTN4-207ENST00000402434 ORC2Q13416 577 aaPredicted RBP21.63■■□□□ 1.05
RTN4-207ENST00000402434 CALCRLQ16602 461 aa21.63■■□□□ 1.05
RTN4-207ENST00000402434 UGCGQ16739 394 aa21.63■■□□□ 1.05
RTN4-207ENST00000402434 ZNF484Q5JVG2 852 aa21.63■■□□□ 1.05
RTN4-207ENST00000402434 RUFY4Q6ZNE9 571 aa21.63■■□□□ 1.05
RTN4-207ENST00000402434 DEFB128Q7Z7B8 93 aa21.63■■□□□ 1.05
RTN4-207ENST00000402434 CKAP2LQ8IYA6 745 aa21.63■■□□□ 1.05
RTN4-207ENST00000402434 INTS4Q96HW7 963 aaKnown RBP21.63■■□□□ 1.05
RTN4-207ENST00000402434 FAM167AQ96KS9 214 aa21.63■■□□□ 1.05
RTN4-207ENST00000402434 RSPH10B2B2RC85 870 aa21.62■■□□□ 1.05
RTN4-207ENST00000402434 K7ELQ4 463 aaPredicted RBP21.62■■□□□ 1.05
RTN4-207ENST00000402434 SOX1O00570 391 aaPredicted RBP21.62■■□□□ 1.05
RTN4-207ENST00000402434 MARCH6O60337 910 aa21.62■■□□□ 1.05
RTN4-207ENST00000402434 NBNO60934 754 aa21.62■■□□□ 1.05
RTN4-207ENST00000402434 CXCL10P02778 98 aa21.62■■□□□ 1.05
RTN4-207ENST00000402434 RPLP2P05387 115 aaKnown RBP21.62■■□□□ 1.05
RTN4-207ENST00000402434 RSPH10BP0C881 870 aa21.62■■□□□ 1.05
RTN4-207ENST00000402434 MBTPS1Q14703 1052 aa21.62■■□□□ 1.05
RTN4-207ENST00000402434 TRAPPC12Q8WVT3 735 aa21.62■■□□□ 1.05
RTN4-207ENST00000402434 PCDHA12Q9UN75 941 aa21.62■■□□□ 1.05
RTN4-207ENST00000402434 PCDHA2Q9Y5H9 948 aa21.62■■□□□ 1.05
RTN4-207ENST00000402434 LAMA2P24043 3122 aaKnown RBP21.62■■□□□ 1.05
RTN4-207ENST00000402434 ATP2B1P20020 1258 aa21.61■■□□□ 1.05
RTN4-207ENST00000402434 MCM7P33993 719 aa21.61■■□□□ 1.05
RTN4-207ENST00000402434 FAM26DQ5JW98 314 aa21.61■■□□□ 1.05
RTN4-207ENST00000402434 LARP1BQ659C4 914 aaKnown RBP21.61■■□□□ 1.05
RTN4-207ENST00000402434 MTHFD1LQ6UB35 978 aa21.61■■□□□ 1.05
RTN4-207ENST00000402434 ZBTB10Q96DT7 871 aa21.61■■□□□ 1.05
RTN4-207ENST00000402434 OATP04181 439 aa21.6■■□□□ 1.05
RTN4-207ENST00000402434 KLRC1P26715 233 aa21.6■■□□□ 1.05
RTN4-207ENST00000402434 TOB1P50616 345 aaPredicted RBP21.6■■□□□ 1.05
RTN4-207ENST00000402434 PRKCEQ02156 737 aa21.6■■□□□ 1.05
RTN4-207ENST00000402434 TTC38Q5R3I4 469 aa21.6■■□□□ 1.05
RTN4-207ENST00000402434 OTOP2Q7RTS6 562 aa21.6■■□□□ 1.05
RTN4-207ENST00000402434 TMEM60Q9H2L4 133 aa21.6■■□□□ 1.05
RTN4-207ENST00000402434 TTC12Q9H892 705 aaPredicted RBP21.6■■□□□ 1.05
RTN4-207ENST00000402434 NRBP2Q9NSY0 501 aa21.6■■□□□ 1.05
RTN4-207ENST00000402434 NOL7Q9UMY1 257 aaKnown RBP21.6■■□□□ 1.05
RTN4-207ENST00000402434 SMIM35A0A1B0GVV1 85 aa21.59■■□□□ 1.05
RTN4-207ENST00000402434 H3BQV1 296 aa21.59■■□□□ 1.05
RTN4-207ENST00000402434 STBD1O95210 358 aa21.59■■□□□ 1.05
RTN4-207ENST00000402434 EPHA7Q15375 998 aa21.59■■□□□ 1.05
RTN4-207ENST00000402434 RSPH3Q86UC2 560 aa21.59■■□□□ 1.05
RTN4-207ENST00000402434 DNAJB3Q8WWF6 145 aa21.59■■□□□ 1.05
RTN4-207ENST00000402434 MTIF3Q9H2K0 278 aaKnown RBP21.59■■□□□ 1.05
RTN4-207ENST00000402434 CXXC1Q9P0U4 656 aaPredicted RBP21.59■■□□□ 1.05
RTN4-207ENST00000402434 CEP131Q9UPN4 1083 aa21.59■■□□□ 1.05
RTN4-207ENST00000402434 CHRNA1P02708 482 aa21.58■■□□□ 1.05
RTN4-207ENST00000402434 PSMC5P62195 406 aa21.58■■□□□ 1.05
RTN4-207ENST00000402434 ZNF174Q15697 407 aa21.58■■□□□ 1.05
RTN4-207ENST00000402434 XKR3Q5GH77 459 aa21.58■■□□□ 1.05
RTN4-207ENST00000402434 MCTP1Q6DN14 999 aa21.58■■□□□ 1.05
RTN4-207ENST00000402434 TRMT1LQ7Z2T5 733 aaKnown RBP21.58■■□□□ 1.05
RTN4-207ENST00000402434 NIFKQ9BYG3 293 aaKnown RBP21.58■■□□□ 1.05
RTN4-207ENST00000402434 FTOQ9C0B1 505 aaKnown RBP eCLIP21.58■■□□□ 1.052e-14■□□□□ 10
RTN4-207ENST00000402434 C22orf31O95567 290 aa21.58■■□□□ 1.04
RTN4-207ENST00000402434 P4HBP07237 508 aaKnown RBP21.58■■□□□ 1.04
RTN4-207ENST00000402434 CTSHP09668 335 aa21.58■■□□□ 1.04
RTN4-207ENST00000402434 ACTN1P12814 892 aa21.58■■□□□ 1.04
RTN4-207ENST00000402434 TXKP42681 527 aa21.58■■□□□ 1.04
RTN4-207ENST00000402434 QARSP47897 775 aaKnown RBP21.58■■□□□ 1.04
RTN4-207ENST00000402434 GPR153Q6NV75 609 aa21.58■■□□□ 1.04
RTN4-207ENST00000402434 NME8Q8N427 588 aa21.58■■□□□ 1.04
RTN4-207ENST00000402434 BANK1Q8NDB2 785 aa21.58■■□□□ 1.04
RTN4-207ENST00000402434 LRCH3Q96II8 777 aa21.58■■□□□ 1.04
RTN4-207ENST00000402434 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.57■■□□□ 1.04
RTN4-207ENST00000402434 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.57■■□□□ 1.04
RTN4-207ENST00000402434 PDCP20941 246 aa21.57■■□□□ 1.04
RTN4-207ENST00000402434 SMAD3P84022 425 aaKnown RBP21.57■■□□□ 1.04
RTN4-207ENST00000402434 MGAT3Q09327 533 aa21.57■■□□□ 1.04
RTN4-207ENST00000402434 TARBP2Q15633 366 aaKnown RBP21.57■■□□□ 1.04
RTN4-207ENST00000402434 NCAPH2Q6IBW4 605 aa21.57■■□□□ 1.04
RTN4-207ENST00000402434 KIAA0319LQ8IZA0 1049 aa21.57■■□□□ 1.04
RTN4-207ENST00000402434 C4orf32Q8N8J7 132 aa21.57■■□□□ 1.04
RTN4-207ENST00000402434 FAM49AQ9H0Q0 323 aaPredicted RBP21.57■■□□□ 1.04
RTN4-207ENST00000402434 MAGEB2O15479 319 aa21.56■■□□□ 1.04
RTN4-207ENST00000402434 DKC1O60832 514 aaKnown RBP eCLIP21.56■■□□□ 1.04
RTN4-207ENST00000402434 BAIAP3O94812 1187 aa21.56■■□□□ 1.04
RTN4-207ENST00000402434 NBR1Q14596 966 aa21.56■■□□□ 1.04
RTN4-207ENST00000402434 PLEKHG4Q58EX7 1191 aa21.56■■□□□ 1.04
RTN4-207ENST00000402434 RILPL1Q5EBL4 403 aa21.56■■□□□ 1.04
RTN4-207ENST00000402434 CNKSR3Q6P9H4 555 aa21.56■■□□□ 1.04
RTN4-207ENST00000402434 CEP89Q96ST8 783 aa21.56■■□□□ 1.04
RTN4-207ENST00000402434 HSD17B14Q9BPX1 270 aa21.56■■□□□ 1.04
RTN4-207ENST00000402434 OSBPL7Q9BZF2 842 aa21.56■■□□□ 1.04
RTN4-207ENST00000402434 RGL1Q9NZL6 768 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms