RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 GOLGA8SH3BPF8 625 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 GCFC2P16383 781 aaKnown RBP3.53□□□□□ -1.84
KNL1-202ENST00000399668 GNGT1P63211 74 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 MTMR1Q13613 665 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 MTMR3Q13615 1198 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 PPP2R5EQ16537 467 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 FAM83BQ5T0W9 1011 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 RINT1Q6NUQ1 792 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 TOGARAM2Q6ZUX3 1019 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 CACNA2D3Q8IZS8 1091 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 ZNF668Q96K58 619 aaPredicted RBP3.53□□□□□ -1.84
KNL1-202ENST00000399668 SH2D3AQ9BRG2 576 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 MAGEF1Q9HAY2 307 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 TMEM260Q9NX78 707 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 KCNG1Q9UIX4 513 aa3.53□□□□□ -1.84
KNL1-202ENST00000399668 PHLPP2Q6ZVD8 1323 aa3.53□□□□□ -1.85
KNL1-202ENST00000399668 NBPF26B4DH59 902 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 TLR3O15455 904 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 CIB2O75838 187 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 SARNPP82979 210 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 LRRC63Q05C16 580 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 HP1BP3Q5SSJ5 553 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 NBPF10Q6P3W6 841 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 FMR1NBQ8N0W7 255 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 NBPF15Q8N660 670 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 TTLL6Q8N841 843 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 SKA2Q8WVK7 121 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 RSRC1Q96IZ7 334 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 WDR11Q9BZH6 1224 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 COA1Q9GZY4 146 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 DHX36Q9H2U1 1008 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 SLC5A4Q9NY91 659 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 STK17AQ9UEE5 414 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PCDHA6Q9UN73 950 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PCDHA8Q9Y5H6 950 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 POTEB3A0JP26 581 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 A6NJR5 290 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 POTECB2RU33 542 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 GSTA1P08263 222 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 INHBAP08476 426 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 RPSAP08865 295 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 GSTA2P09210 222 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 SLCO1A2P46721 670 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 RASSF2P50749 326 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PLTPP55058 493 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 BFSP1Q12934 665 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 POTEBQ6S5H4 581 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 RETREG2Q8NC44 543 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ENOX1Q8TC92 643 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.52□□□□□ -1.851e-6■□□□□ 11.3
KNL1-202ENST00000399668 HSPH1Q92598 858 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 IQCDQ96DY2 449 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 NT5C1BQ96P26 610 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 TMEM47Q9BQJ4 181 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 NDST4Q9H3R1 872 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 DCP1AQ9NPI6 582 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 MKRN1Q9UHC7 482 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 DAAM1Q9Y4D1 1078 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 CAPN7Q9Y6W3 813 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 HEATR5BQ9P2D3 2071 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 MED12Q93074 2177 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PNPLA6Q8IY17 1366 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 TRIOBPQ9H2D6 2365 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 TNS3Q68CZ2 1445 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 A0A0G2JLW4 131 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ZBTB7AO95365 584 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ACSL3O95573 720 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 BAG2O95816 211 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 SLC4A1P02730 911 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 NSFP46459 744 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 YWHAEP62258 255 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 GFPT1Q06210 699 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 ZKSCAN8Q15776 578 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 PFKFB3Q16875 520 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 RNF207Q6ZRF8 634 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 DHX40Q8IX18 779 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 SRBD1Q8N5C6 995 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 GABPB2Q8TAK5 448 aaPredicted RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 MAIP1Q8WWC4 291 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 FAM149B1Q96BN6 582 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PANX2Q96RD6 677 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 BEGAINQ9BUH8 593 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 HESX1Q9UBX0 185 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ADD3Q9UEY8 706 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 ZDHHC9Q9Y397 364 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 NWD2Q9ULI1 1742 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ANKRD36CQ5JPF3 1778 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 INTS1Q8N201 2190 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 ZWINTO95229 277 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 POLR2BP30876 1174 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 STAT3P40763 770 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 ECE1P42892 770 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 LIG3P49916 1009 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 DALRD3Q5D0E6 543 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 ARL6IP4Q66PJ3 421 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 RNF10Q8N5U6 811 aaKnown RBP3.52□□□□□ -1.85
KNL1-202ENST00000399668 ATP6V0A1Q93050 837 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 MS4A14Q96JA4 679 aa3.52□□□□□ -1.85
KNL1-202ENST00000399668 PARD6BQ9BYG5 372 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms