RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 DYNC1I2Q13409 638 aaKnown RBP12.09□□□□□ -0.47
LAMA3-203ENST00000399516 GRAMD4Q6IC98 578 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 TRIML2Q8N7C3 387 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 RUBCNQ92622 972 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 DNAJC17Q9NVM6 304 aaKnown RBP12.09□□□□□ -0.47
LAMA3-203ENST00000399516 CPSF1Q10570 1443 aaKnown RBP12.09□□□□□ -0.47
LAMA3-203ENST00000399516 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
LAMA3-203ENST00000399516 ALKBH5Q6P6C2 394 aaKnown RBP12.09□□□□□ -0.47
LAMA3-203ENST00000399516 ZBED1O96006 694 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 CDR2Q01850 454 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 GFPT1Q06210 699 aaPredicted RBP12.09□□□□□ -0.47
LAMA3-203ENST00000399516 MAGED2Q9UNF1 606 aaPredicted RBP12.09□□□□□ -0.47
LAMA3-203ENST00000399516 TARSL2A2RTX5 802 aaKnown RBP12.09□□□□□ -0.47
LAMA3-203ENST00000399516 KRT39Q6A163 491 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 MIS18BP1Q6P0N0 1132 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 FBXL13Q8NEE6 735 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 SAAL1Q96ER3 474 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 CALR3Q96L12 384 aaKnown RBP12.09□□□□□ -0.47
LAMA3-203ENST00000399516 NUDCD1Q96RS6 583 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 XDHP47989 1333 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 LIFRP42702 1097 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 WDR11Q9BZH6 1224 aa12.09□□□□□ -0.47
LAMA3-203ENST00000399516 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.09□□□□□ -0.47
LAMA3-203ENST00000399516 TFAMQ00059 246 aaKnown RBP12.08□□□□□ -0.47
LAMA3-203ENST00000399516 SPICE1Q8N0Z3 855 aa12.08□□□□□ -0.47
LAMA3-203ENST00000399516 SLC5A4Q9NY91 659 aa12.08□□□□□ -0.47
LAMA3-203ENST00000399516 REREQ9P2R6 1566 aa12.08□□□□□ -0.47
LAMA3-203ENST00000399516 OSBPL9Q96SU4 736 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 MIF4GDA9UHW6 222 aaKnown RBP12.08□□□□□ -0.48
LAMA3-203ENST00000399516 TCP10L2B9ZVM9 353 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 KRT10P13645 584 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 CAV1Q03135 178 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 TTC25Q96NG3 672 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 KIFC3Q9BVG8 833 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 SNX25Q9H3E2 840 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 G3BP2Q9UN86 482 aaKnown RBP12.08□□□□□ -0.48
LAMA3-203ENST00000399516 KIF1CO43896 1103 aaKnown RBP12.08□□□□□ -0.48
LAMA3-203ENST00000399516 HP1BP3Q5SSJ5 553 aaPredicted RBP12.08□□□□□ -0.48
LAMA3-203ENST00000399516 FAM47EQ6ZV65 393 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 CEP19Q96LK0 163 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 OSBPL1AQ9BXW6 950 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 STOML1Q9UBI4 398 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 PRKAB2O43741 272 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 HIPK4Q8NE63 616 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 PSPC1Q8WXF1 523 aaKnown RBP12.08□□□□□ -0.48
LAMA3-203ENST00000399516 THOC1Q96FV9 657 aaKnown RBP12.08□□□□□ -0.48
LAMA3-203ENST00000399516 PLEKHG3A1L390 1219 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 COPEO14579 308 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 TOB2Q14106 344 aaPredicted RBP12.08□□□□□ -0.48
LAMA3-203ENST00000399516 CCDC144BQ3MJ40 725 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 KCNV2Q8TDN2 545 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 ZWILCHQ9H900 591 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 MORC2Q9Y6X9 1032 aaPredicted RBP12.08□□□□□ -0.48
LAMA3-203ENST00000399516 PSMA2P25787 234 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 IGBP1P78318 339 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 PI16Q6UXB8 463 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 TRIM67Q6ZTA4 783 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 SMYD3Q9H7B4 428 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 SLC24A3Q9HC58 644 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 HDAC6Q9UBN7 1215 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 SLC4A1P02730 911 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 BIRC2Q13490 618 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 YIPF3Q9GZM5 350 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 ADAMTS1Q9UHI8 967 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 LCMT1Q9UIC8 334 aa12.08□□□□□ -0.48
LAMA3-203ENST00000399516 CCND2P30279 289 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 YWHAHQ04917 246 aaPredicted RBP12.07□□□□□ -0.48
LAMA3-203ENST00000399516 MYO1EQ12965 1108 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 GMNCA6NCL1 334 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 TJP3O95049 919 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 OLFM3Q96PB7 478 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 KLC2Q9H0B6 622 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 NDE1Q9NXR1 346 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 EFCAB6Q5THR3 1501 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 ANKRD65E5RJM6 399 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 TAF1BQ53T94 588 aaPredicted RBP12.07□□□□□ -0.48
LAMA3-203ENST00000399516 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.07□□□□□ -0.48
LAMA3-203ENST00000399516 LRRC37BQ96QE4 947 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 STK32BQ9NY57 414 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 APOBEC2Q9Y235 224 aaKnown RBP12.07□□□□□ -0.48
LAMA3-203ENST00000399516 GDAQ9Y2T3 454 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 TRIM49BA6NDI0 452 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 FSCBQ5H9T9 825 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 DCAF15Q66K64 600 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 CHMP6Q96FZ7 201 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 AIFM3Q96NN9 605 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 QRICH2Q9H0J4 1663 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 ESYT3A0FGR9 886 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 MAN1A2O60476 641 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 PMS2P54278 862 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 RGS9BPQ6ZS82 235 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
LAMA3-203ENST00000399516 GIPC2Q8TF65 315 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 ZC3H15Q8WU90 426 aaKnown RBP12.07□□□□□ -0.48
LAMA3-203ENST00000399516 TTC17Q96AE7 1141 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 TMEM2Q9UHN6 1383 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 CD58P19256 250 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 NECTIN1Q15223 517 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 OSBP2Q969R2 916 aa12.07□□□□□ -0.48
LAMA3-203ENST00000399516 PLEKHG1Q9ULL1 1385 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms