RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 PALB2Q86YC2 1186 aa11.98□□□□□ -0.49
ITSN1-207ENST00000399338 MB21D2Q8IYB1 491 aaPredicted RBP11.98□□□□□ -0.49
ITSN1-207ENST00000399338 DEPTORQ8TB45 409 aa11.98□□□□□ -0.49
ITSN1-207ENST00000399338 INPP5DQ92835 1189 aa11.98□□□□□ -0.49
ITSN1-207ENST00000399338 HAUS1Q96CS2 278 aa11.98□□□□□ -0.49
ITSN1-207ENST00000399338 EPB41L4BQ9H329 900 aa11.98□□□□□ -0.49
ITSN1-207ENST00000399338 ARHGEF38Q9NXL2 777 aa11.98□□□□□ -0.49
ITSN1-207ENST00000399338 CPS1P31327 1500 aa11.98□□□□□ -0.49
ITSN1-207ENST00000399338 DIP2AQ14689 1571 aa11.98□□□□□ -0.49
ITSN1-207ENST00000399338 WDR46O15213 610 aaKnown RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 BIRC5O15392 142 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 P4HA2O15460 535 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 ATP5HO75947 161 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 KRT38O76015 456 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 NUDT17P0C025 328 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 TROVE2P10155 538 aaKnown RBP eCLIP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 EEF1GP26641 437 aaKnown RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 GIT2Q14161 759 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 TMEM259Q4ZIN3 620 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 FBXO41Q8TF61 875 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 OLFM3Q96PB7 478 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 KIAA1522Q9P206 1035 aaPredicted RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 DBNLQ9UJU6 430 aaKnown RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 ZNF180Q9UJW8 692 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 SYNPO2Q9UMS6 1093 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 NWD2Q9ULI1 1742 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 UBTFL6P0CB48 400 aaPredicted RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 PORP16435 677 aaPredicted RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 MTTPP55157 894 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 IFI35P80217 286 aaPredicted RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 NANOGNBQ7Z5D8 188 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 CYP4X1Q8N118 509 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 SCFD2Q8WU76 684 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 SEC14L1Q92503 715 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 KAZALD1Q96I82 304 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 HAUS7Q99871 368 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 TRAIPQ9BWF2 469 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 PFDN4Q9NQP4 134 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 TUBA8Q9NY65 449 aaPredicted RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 IL1RAPL1Q9NZN1 696 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 SEC63Q9UGP8 760 aaKnown RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 PLAGL2Q9UPG8 496 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 ZNF148Q9UQR1 794 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 A6NJR5 290 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 LSM1O15116 133 aaKnown RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 ASMTLO95671 621 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 FIGNQ5HY92 759 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 MARK2Q7KZI7 788 aaKnown RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 MAP7D3Q8IWC1 876 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 DIS3LQ8TF46 1054 aaKnown RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 CTNNBL1Q8WYA6 563 aaPredicted RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 TBCCD1Q9NVR7 557 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 DBF4Q9UBU7 674 aaPredicted RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 PCDHB6Q9Y5E3 794 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 PTPRUQ92729 1446 aa11.97□□□□□ -0.49
ITSN1-207ENST00000399338 PARP4Q9UKK3 1724 aaKnown RBP11.97□□□□□ -0.49
ITSN1-207ENST00000399338 MAP3K19Q56UN5 1328 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 TCP11X1B4DZS4 312 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 BUB1O43683 1085 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 ZCCHC18P0CG32 403 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 EMP3P54852 163 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 GEMIN4P57678 1058 aaKnown RBP11.96□□□□□ -0.49
ITSN1-207ENST00000399338 IDI1Q13907 227 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 HLFQ16534 295 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 WDR72Q3MJ13 1102 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 SH3D19Q5HYK7 790 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 MEI1Q5TIA1 1274 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 THOC7Q6I9Y2 204 aaKnown RBP11.96□□□□□ -0.49
ITSN1-207ENST00000399338 TYW1BQ6NUM6 668 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 STAG2Q8N3U4 1231 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 SAMD3Q8N6K7 520 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 ANKRD13CQ8N6S4 541 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 KBTBD3Q8NAB2 608 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 EPSTI1Q96J88 318 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 MPP4Q96JB8 637 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 SNX27Q96L92 541 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 TUBGCP5Q96RT8 1024 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 SIKE1Q9BRV8 207 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 TBC1D10AQ9BXI6 508 aa11.96□□□□□ -0.49
ITSN1-207ENST00000399338 CPDO75976 1380 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 AGTP01019 485 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 MAGEA1P43355 309 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 ACVR2BQ13705 512 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 MAP7D1Q3KQU3 841 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 KHDC1Q4VXA5 237 aaKnown RBP11.96□□□□□ -0.5
ITSN1-207ENST00000399338 SMUG1Q53HV7 270 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 TNFAIP8L3Q5GJ75 292 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 C16orf87Q6PH81 154 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 C3orf62Q6ZUJ4 267 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 PROSER2Q86WR7 435 aaPredicted RBP11.96□□□□□ -0.5
ITSN1-207ENST00000399338 ECHDC2Q86YB7 292 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 ASCC2Q9H1I8 757 aaPredicted RBP11.96□□□□□ -0.5
ITSN1-207ENST00000399338 EXOC1Q9NV70 894 aa11.96□□□□□ -0.5
ITSN1-207ENST00000399338 EIF3FO00303 357 aaPredicted RBP11.95□□□□□ -0.5
ITSN1-207ENST00000399338 CES2O00748 559 aa11.95□□□□□ -0.5
ITSN1-207ENST00000399338 DAPK3O43293 454 aa11.95□□□□□ -0.5
ITSN1-207ENST00000399338 PYGMP11217 842 aa11.95□□□□□ -0.5
ITSN1-207ENST00000399338 HOXA10P31260 410 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms