RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 KRT25Q7Z3Z0 450 aa16.84■□□□□ 0.29
SMIM11A-203ENST00000399299 SLC5A5Q92911 643 aa16.84■□□□□ 0.29
SMIM11A-203ENST00000399299 GTF3C6Q969F1 213 aa16.84■□□□□ 0.29
SMIM11A-203ENST00000399299 MBOAT7Q96N66 472 aa16.84■□□□□ 0.29
SMIM11A-203ENST00000399299 ZBED2Q9BTP6 218 aa16.84■□□□□ 0.29
SMIM11A-203ENST00000399299 OSBPL7Q9BZF2 842 aa16.84■□□□□ 0.29
SMIM11A-203ENST00000399299 PCDHA10Q9Y5I2 948 aa16.84■□□□□ 0.29
SMIM11A-203ENST00000399299 MAFBQ9Y5Q3 323 aaPredicted RBP16.84■□□□□ 0.29
SMIM11A-203ENST00000399299 SQORQ9Y6N5 450 aa16.84■□□□□ 0.29
SMIM11A-203ENST00000399299 COL4A6Q14031 1691 aa16.84■□□□□ 0.29
SMIM11A-203ENST00000399299 SMIM35A0A1B0GVV1 85 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 WDR64B1ANS9 1081 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 PSAPP07602 524 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 NEK4P51957 841 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 MRPS6P82932 125 aaKnown RBP16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 ADGRE1Q14246 886 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 NONOQ15233 471 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 ME3Q16798 604 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 ZNF484Q5JVG2 852 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 FBXO47Q5MNV8 452 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 IER5Q5VY09 327 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 SWSAP1Q6NVH7 229 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 MTHFD1LQ6UB35 978 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 TMCO2Q7Z6W1 182 aaPredicted RBP16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 LOXHD1Q8IVV2 1947 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 TRAPPC12Q8WVT3 735 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 WASF1Q92558 559 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 ORC3Q9UBD5 711 aaPredicted RBP16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 KCNJ14Q9UNX9 436 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 IGSF9BQ9UPX0 1349 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 CDY2AQ9Y6F7 541 aa16.83■□□□□ 0.28
SMIM11A-203ENST00000399299 KDM3AQ9Y4C1 1321 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 GAS7O60861 476 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 ARHGEF15O94989 841 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 GHRP10912 638 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 POU3F3P20264 500 aaPredicted RBP16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 ATP4AP20648 1035 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 SFNP31947 248 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 LPIN1Q14693 890 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 LRCH2Q5VUJ6 765 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 MYOCDQ8IZQ8 938 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 NME8Q8N427 588 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 USP38Q8NB14 1042 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 BBXQ8WY36 941 aaPredicted RBP16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 UIMC1Q96RL1 719 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 FAM49AQ9H0Q0 323 aaPredicted RBP16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 INSL6Q9Y581 213 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 EVPLQ92817 2033 aa16.82■□□□□ 0.28
SMIM11A-203ENST00000399299 COL4A4P53420 1690 aaPredicted RBP16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 CCDC194A0A1B0GVG4 234 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 LCHNA4D1U4 455 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 M0QZ92 97 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 PSMD10O75832 226 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 LARGE1O95461 756 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 TDP2O95551 362 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 KLRC1P26715 233 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 JAK3P52333 1124 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 HTRA4P83105 476 aaPredicted RBP16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 TSHZ1Q6ZSZ6 1077 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 RDM1Q8NG50 284 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 TOP1MTQ969P6 601 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 ZBTB10Q96DT7 871 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 FAM167AQ96KS9 214 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 TEKT3Q9BXF9 490 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 DISC1Q9NRI5 854 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 SAMM50Q9Y512 469 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 TRPV2Q9Y5S1 764 aa16.81■□□□□ 0.28
SMIM11A-203ENST00000399299 ZBTB42B2RXF5 422 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 FDPSP14324 419 aaKnown RBP16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 IGFBP4P22692 258 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 INF2Q27J81 1249 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 C8orf34Q49A92 452 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 B3GNT9Q6UX72 402 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 FAM43BQ6ZT52 329 aaPredicted RBP16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 CKAP2LQ8IYA6 745 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 NECAB1Q8N987 351 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 NSUN7Q8NE18 718 aaKnown RBP16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 ETNPPLQ8TBG4 499 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 SP7Q8TDD2 431 aaPredicted RBP16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 GABBR1Q9UBS5 961 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 CEP131Q9UPN4 1083 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 REV3LO60673 3130 aa16.8■□□□□ 0.28
SMIM11A-203ENST00000399299 TTC3P53804 2025 aa16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 LINC01553A4QN01 128 aa16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 RBAK-RBAKDNI3L0D1 243 aa16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 C22orf31O95567 290 aa16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 GCFC2P16383 781 aaKnown RBP16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 ERVK-21P61565 698 aa16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 PPP4R3AQ6IN85 833 aa16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 NEK8Q86SG6 692 aa16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 ARNTL2Q8WYA1 636 aa16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 NAP1L4Q99733 375 aaKnown RBP16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 CELF4Q9BZC1 486 aaKnown RBP16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 UNC45AQ9H3U1 944 aa16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 GJB4Q9NTQ9 266 aa16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 DDX25Q9UHL0 483 aaKnown RBP16.79■□□□□ 0.28
SMIM11A-203ENST00000399299 PRRC2BQ5JSZ5 2229 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms