RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 RCOR1Q9UKL0 485 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ZNF215Q9UL58 517 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ARID2Q68CP9 1835 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 POTEB3A0JP26 581 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ZBTB39O15060 712 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SPTLC2O15270 562 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 P4HBP07237 508 aaKnown RBP13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 QARSP47897 775 aaKnown RBP13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SLC26A2P50443 739 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 RTP1P59025 263 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CHMP4BP1P59074 171 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PSMC5P62195 406 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ZNF200P98182 395 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 STK38Q15208 465 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 MARCH8Q5T0T0 291 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 AXDND1Q5T1B0 1012 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 GDF6Q6KF10 455 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 NFRKBQ6P4R8 1299 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 POTEBQ6S5H4 581 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CATSPER3Q86XQ3 398 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 LRRC15Q8TF66 581 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 LEO1Q8WVC0 666 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PNMA5Q96PV4 448 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CEP89Q96ST8 783 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 POLR3CQ9BUI4 534 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PCDH10Q9P2E7 1040 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 LRWD1Q9UFC0 647 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 GTF2IRD1Q9UHL9 959 aa13.93□□□□□ -0.18
HLA-DQB1-203ENST00000399082 A0A087WWV3 80 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 RBAK-RBAKDNI3L0D1 243 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 B4GALT4O60513 344 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PPP6R2O75170 966 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 LYPLA2O95372 231 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CD4P01730 458 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 OATP04181 439 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 INSRRP14616 1297 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 RPA1P27694 616 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 RGS19P49795 217 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 KRT85P78386 507 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TARBP2Q15633 366 aaKnown RBP13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SPECC1Q5M775 1068 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 POTEGQ6S5H5 508 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ANO5Q75V66 913 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ANKRD33Q7Z3H0 272 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 C4orf19Q8IY42 314 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 NEK9Q8TD19 979 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 LMBR1Q8WVP7 490 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TRAPPC12Q8WVT3 735 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TNPO1Q92973 898 aaKnown RBP13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ATP6V0A1Q93050 837 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 WNT8BQ93098 351 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 VTI1AQ96AJ9 217 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TRPV6Q9H1D0 765 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 GDPD2Q9HCC8 539 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TRMT13Q9NUP7 481 aaKnown RBP13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SETD4Q9NVD3 440 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
HLA-DQB1-203ENST00000399082 NCLP19338 710 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 LONP1P36776 959 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TLE2Q04725 743 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PTPN11Q06124 597 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PPFIA1Q13136 1202 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 GRB10Q13322 594 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 GRIK4Q16099 956 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 FAM47CQ5HY64 1035 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 HYIQ5T013 277 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PLA2G4FQ68DD2 849 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 KCNK18Q7Z418 384 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TPH2Q8IWU9 490 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 C7orf31Q8N865 590 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 KCNG4Q8TDN1 519 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SNX29Q8TEQ0 813 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 DHX38Q92620 1227 aaKnown RBP13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 EPSTI1Q96J88 318 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SH2D3AQ9BRG2 576 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ZSWIM4Q9H7M6 989 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TUFT1Q9NNX1 390 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PCDHA7Q9UN72 937 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ATP6V1DQ9Y5K8 247 aa13.91□□□□□ -0.18
HLA-DQB1-203ENST00000399082 A0A087X0B3 334 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 MBLAC1A4D2B0 266 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TREHO43280 583 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 HBP1O60381 514 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PQBP1O60828 265 aaKnown RBP13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CCT6AP40227 531 aaKnown RBP13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 NPEPPSP55786 919 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 FAAP100Q0VG06 881 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TMEM119Q4V9L6 283 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 XKR3Q5GH77 459 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SHC4Q6S5L8 630 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CKAP2LQ8IYA6 745 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ERMNQ8TAM6 284 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 BBXQ8WY36 941 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SPATA32Q96LK8 384 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 AK8Q96MA6 479 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TOX2Q96NM4 488 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms