RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 ZSWIM4Q9H7M6 989 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 NHEJ1Q9H9Q4 299 aaPredicted RBP28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 FZD1Q9UP38 647 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 PLAGL2Q9UPG8 496 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 UBE4BO95155 1302 aa28.39■■■□□ 2.14
SHARPIN-202ENST00000398712 A0A0U1RQJ8 604 aa28.39■■■□□ 2.13
SHARPIN-202ENST00000398712 ZBTB39O15060 712 aa28.39■■■□□ 2.13
SHARPIN-202ENST00000398712 ERCC3P19447 782 aa28.39■■■□□ 2.13
SHARPIN-202ENST00000398712 GUCY2CP25092 1073 aa28.39■■■□□ 2.13
SHARPIN-202ENST00000398712 ZNF131P52739 623 aa28.39■■■□□ 2.13
SHARPIN-202ENST00000398712 ITGB3BPQ13352 177 aaPredicted RBP28.39■■■□□ 2.13
SHARPIN-202ENST00000398712 ATRIPQ8WXE1 791 aa28.39■■■□□ 2.13
SHARPIN-202ENST00000398712 WNK4Q96J92 1243 aa28.39■■■□□ 2.13
SHARPIN-202ENST00000398712 MYCLP12524 364 aaPredicted RBP28.38■■■□□ 2.13
SHARPIN-202ENST00000398712 ARHGAP25P42331 645 aa28.38■■■□□ 2.13
SHARPIN-202ENST00000398712 MAP3K9P80192 1104 aa28.38■■■□□ 2.13
SHARPIN-202ENST00000398712 SNRNP48Q6IEG0 339 aaKnown RBP28.38■■■□□ 2.13
SHARPIN-202ENST00000398712 IRX2Q9BZI1 471 aaPredicted RBP28.38■■■□□ 2.13
SHARPIN-202ENST00000398712 HAUS4Q9H6D7 363 aa28.38■■■□□ 2.13
SHARPIN-202ENST00000398712 REXO2Q9Y3B8 237 aaKnown RBP28.38■■■□□ 2.13
SHARPIN-202ENST00000398712 EIF3CLB5ME19 914 aaKnown RBP28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 HSP90AA2PQ14568 343 aaPredicted RBP28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 ZNF569Q5MCW4 686 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 CATSPERGQ6ZRH7 1159 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 MNS1Q8NEH6 495 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 EIF3CQ99613 913 aaKnown RBP28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 ASTN1O14525 1302 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 SFI1A8K8P3 1242 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 EPHB6O15197 1021 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 SLC16A3O15427 465 aaKnown RBP28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 KCNMA1Q12791 1236 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 BAATQ14032 418 aaPredicted RBP28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 ZNF662Q6ZS27 426 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 CACNA2D4Q7Z3S7 1137 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 SMCR8Q8TEV9 937 aaPredicted RBP28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 MAF1Q9H063 256 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 NUCKS1Q9H1E3 243 aaKnown RBP28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 PDCL3Q9H2J4 239 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 ARMCX3Q9UH62 379 aaPredicted RBP28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 SAMM50Q9Y512 469 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 RIPK3Q9Y572 518 aa28.37■■■□□ 2.13
SHARPIN-202ENST00000398712 MYPNQ86TC9 1320 aa28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 ATP2A1O14983 1001 aa28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 NR3C1P04150 777 aa28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 CCND2P30279 289 aa28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 NAA30Q147X3 362 aaPredicted RBP28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 METTL14Q9HCE5 456 aaKnown RBP28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 CEP72Q9P209 647 aa28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 TCEAL9Q9UHQ7 104 aa28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 DBR1Q9UK59 544 aaKnown RBP28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 AFG3L2Q9Y4W6 797 aa28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 MRFAP1Q9Y605 127 aa28.36■■■□□ 2.13
SHARPIN-202ENST00000398712 MYH11P35749 1972 aa28.35■■■□□ 2.13
SHARPIN-202ENST00000398712 LYPLA2O95372 231 aa28.35■■■□□ 2.13
SHARPIN-202ENST00000398712 NFIL3Q16649 462 aa28.35■■■□□ 2.13
SHARPIN-202ENST00000398712 FAM178BQ8IXR5 827 aa28.35■■■□□ 2.13
SHARPIN-202ENST00000398712 ZNF214Q9UL59 606 aaPredicted RBP28.35■■■□□ 2.13
SHARPIN-202ENST00000398712 EPB41P11171 864 aaKnown RBP28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 QARSP47897 775 aaKnown RBP28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 JAK3P52333 1124 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 HERVK_113P62684 666 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 TUBB2AQ13885 445 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 RRAGAQ7L523 313 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 PDCL2Q8N4E4 241 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 CCDC42Q96M95 316 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 TUBB2BQ9BVA1 445 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 POLD4Q9HCU8 107 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 CGNQ9P2M7 1197 aaKnown RBP28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 POLR2AP24928 1970 aaKnown RBP28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 WDR90Q96KV7 1748 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 NMT1P30419 496 aaKnown RBP28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 PDXDC1Q6P996 788 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 KIAA1328Q86T90 577 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 CCDC155Q8N6L0 562 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 RBM46Q8TBY0 533 aaKnown RBP28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 BAP1Q92560 729 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 TEX13BQ9BXU2 312 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 HOXC10Q9NYD6 342 aa28.34■■■□□ 2.13
SHARPIN-202ENST00000398712 CTAGE9A4FU28 777 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 LRRC53A6NM62 1247 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 SFNP31947 248 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 KRT76Q01546 638 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 KCNH2Q12809 1159 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 SH3D19Q5HYK7 790 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 ODR4Q5SWX8 454 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 PADI6Q6TGC4 694 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 ZNF720Q7Z2F6 126 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 LSM14BQ9BX40 385 aaKnown RBP28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 BCAS3Q9H6U6 928 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 ADARB2Q9NS39 739 aaKnown RBP28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 PCDHB13Q9Y5F0 798 aa28.33■■■□□ 2.13
SHARPIN-202ENST00000398712 TESPA1A2RU30 521 aaPredicted RBP28.32■■■□□ 2.12
SHARPIN-202ENST00000398712 USP2O75604 605 aaPredicted RBP28.32■■■□□ 2.12
SHARPIN-202ENST00000398712 TMEM132BQ14DG7 1078 aa28.32■■■□□ 2.12
SHARPIN-202ENST00000398712 NLRX1Q86UT6 975 aa28.32■■■□□ 2.12
SHARPIN-202ENST00000398712 SLC35F6Q8N357 371 aa28.32■■■□□ 2.12
SHARPIN-202ENST00000398712 GPRASP2Q96D09 838 aa28.32■■■□□ 2.12
SHARPIN-202ENST00000398712 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.32■■■□□ 2.12
SHARPIN-202ENST00000398712 V9GYY5 206 aaPredicted RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms