RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 AGPSO00116 658 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ACSL3O95573 720 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 FUT2Q10981 343 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 LRRC14Q15048 493 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 GDAP1Q8TB36 358 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CAVIN3Q969G5 261 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 MAD2L2Q9UI95 211 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 RGPD1P0DJD0 1748 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ALDH3A1P30838 453 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 COPB2P35606 906 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SCNN1DP51172 638 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 GRB10Q13322 594 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SLFN12Q8IYM2 578 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PPM1KQ8N3J5 372 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 BICD1Q96G01 975 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ISCUQ9H1K1 167 aa12.07□□□□□ -0.48
CSGALNACT1-202ENST00000397998 THAP12O43422 761 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 GCFC2P16383 781 aaKnown RBP12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 KRT15P19012 456 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 TMEM132AQ24JP5 1023 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 TBC1D10BQ4KMP7 808 aaPredicted RBP12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 FAM212AQ96EL1 285 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 EHMT1Q9H9B1 1298 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SLC24A3Q9HC58 644 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 USP40Q9NVE5 1235 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ZNF263O14978 683 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 UCHL3P15374 230 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SBK1Q52WX2 424 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 THOC1Q96FV9 657 aaKnown RBP12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 TMOD4Q9NZQ9 345 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 HIP1RO75146 1068 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PSMC2P35998 433 aaKnown RBP12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ADCY8P40145 1251 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PMS2P54278 862 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 TRIP13Q15645 432 aaPredicted RBP12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ODR4Q5SWX8 454 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 METTL13Q8N6R0 699 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SPZ1Q9BXG8 430 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 DNAJC12Q9UKB3 198 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 USTQ9Y2C2 406 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CEP83Q9Y592 693 aa12.06□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ZNF233A6NK53 670 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SLC37A4O43826 429 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 GAS8O95995 478 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SNAP25P60880 206 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 MIIPQ5JXC2 388 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SUGP1Q8IWZ8 645 aaKnown RBP12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PIGOQ8TEQ8 1089 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 NGLY1Q96IV0 654 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PASKQ96RG2 1323 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 EIF4E1BA6NMX2 242 aaKnown RBP12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 NTSR2O95665 410 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 NR3C1P04150 777 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ELF1P32519 619 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 GEMIN8Q9NWZ8 242 aaKnown RBP12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 TMOD2Q9NZR1 351 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PNMA6FA0A0J9YX94 578 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 TTLL1O95922 423 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 USP11P51784 963 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ZNF131P52739 623 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 UBXN2AP68543 259 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 MYL7Q01449 175 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ITIH3Q06033 890 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 TRADDQ15628 312 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CLUL1Q15846 466 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PPP4R3CPQ6ZMV5 832 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 GLIS3Q8NEA6 775 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ARHGEF2Q92974 986 aaKnown RBP12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CCDC127Q96BQ5 260 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 PCIF1Q9H4Z3 704 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SLITRK6Q9H5Y7 841 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 YY1AP1Q9H869 796 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 BCS1LQ9Y276 419 aa12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 RGPD8O14715 1765 aaPredicted RBP12.05□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CAMTA2O94983 1202 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CHN1P15882 459 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 RASA1P20936 1047 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 GALCP54803 685 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SKOR1P84550 965 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 UAP1Q16222 522 aaPredicted RBP12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 KNOP1Q1ED39 458 aaKnown RBP12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 C6orf118Q5T5N4 469 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CYB5D1Q6P9G0 228 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 TNFRSF25Q93038 417 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 RUNDC3BQ96NL0 473 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 USP17L10C9JJH3 530 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 GPATCH4Q5T3I0 446 aaKnown RBP12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 LRIG3Q6UXM1 1119 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 NEDD1Q8NHV4 660 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 RAPGEF5Q92565 580 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ANO3Q9BYT9 981 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 TMBIM4Q9HC24 238 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 CCNL1Q9UK58 526 aaPredicted RBP12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 IKBKGQ9Y6K9 419 aa12.04□□□□□ -0.48
CSGALNACT1-202ENST00000397998 ATP2A1O14983 1001 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms