RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 VTA1Q9NP79 307 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 RMND1Q9NWS8 449 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 ARIH2O95376 493 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 TBC1D8O95759 1140 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 SYT2Q8N9I0 419 aaPredicted RBP21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 USP6NLQ92738 828 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 DDX12PQ92771 950 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 TINF2Q9BSI4 451 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 XPO4Q9C0E2 1151 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 PDGFCQ9NRA1 345 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 TELO2Q9Y4R8 837 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 KLRC4O43908 158 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 GGPS1O95749 300 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 SNAI1O95863 264 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 PSAPP07602 524 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 MYL5Q02045 173 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 CCDC62Q6P9F0 684 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 DYMQ7RTS9 669 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 GPBP1Q86WP2 473 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 SCFD2Q8WU76 684 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 BHMT2Q9H2M3 363 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 BMP2KQ9NSY1 1161 aaPredicted RBP21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 IFNKQ9P0W0 207 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 GJD2Q9UKL4 321 aa21.47■■□□□ 1.03
PDLIM2-204ENST00000397760 ZBTB39O15060 712 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 FARP2O94887 1054 aaPredicted RBP21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 HOXC6P09630 235 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 TXNP10599 105 aaKnown RBP21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 CYP11B2P19099 503 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 CTGFP29279 349 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 PSMC5P62195 406 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 TTLL4Q14679 1199 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 KCNB1Q14721 858 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 KMT5BQ4FZB7 885 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 CNNM4Q6P4Q7 775 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 ABHD15Q6UXT9 468 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 MSL3Q8N5Y2 521 aaKnown RBP21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 SOCS4Q8WXH5 440 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 MLXIPQ9HAP2 919 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 SYNGAP1Q96PV0 1343 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 LRRC37A2A6NM11 1700 aa21.46■■□□□ 1.03
PDLIM2-204ENST00000397760 LYPLA2O95372 231 aa21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 RGS2P41220 211 aa21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 FCGRTP55899 365 aa21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 ARID5BQ14865 1188 aa21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 UGCGQ16739 394 aa21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 SWSAP1Q6NVH7 229 aa21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 TAPT1Q6NXT6 567 aa21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 MIS18BP1Q6P0N0 1132 aa21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 METTL7BQ6UX53 244 aa21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 PDCL2Q8N4E4 241 aa21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 CCDC47Q96A33 483 aaKnown RBP21.45■■□□□ 1.03
PDLIM2-204ENST00000397760 KIAA1217Q5T5P2 1943 aa21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 CCP110O43303 1012 aa21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 CYP2B6P20813 491 aa21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 SFPQP23246 707 aaKnown RBP eCLIP21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 PSMC4P43686 418 aa21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 LACTBP83111 547 aaPredicted RBP21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 FANCCQ00597 558 aa21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 CELF3Q5SZQ8 465 aaKnown RBP21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 C4orf19Q8IY42 314 aa21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 MLKLQ8NB16 471 aa21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 KATNBL1Q9H079 304 aa21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 GABBR1Q9UBS5 961 aa21.45■■□□□ 1.02
PDLIM2-204ENST00000397760 ZNF236Q9UL36 1845 aa21.44■■□□□ 1.02
PDLIM2-204ENST00000397760 TRPA1O75762 1119 aa21.44■■□□□ 1.02
PDLIM2-204ENST00000397760 ATG7O95352 703 aa21.44■■□□□ 1.02
PDLIM2-204ENST00000397760 SUPT20HL2P0C7V6 817 aa21.44■■□□□ 1.02
PDLIM2-204ENST00000397760 ARSHQ5FYA8 562 aa21.44■■□□□ 1.02
PDLIM2-204ENST00000397760 TSC1Q92574 1164 aa21.44■■□□□ 1.02
PDLIM2-204ENST00000397760 DNAJC19Q96DA6 116 aa21.44■■□□□ 1.02
PDLIM2-204ENST00000397760 ARHGAP39Q9C0H5 1083 aa21.44■■□□□ 1.02
PDLIM2-204ENST00000397760 EXOC1Q9NV70 894 aa21.44■■□□□ 1.02
PDLIM2-204ENST00000397760 RNF186Q9NXI6 227 aa21.44■■□□□ 1.02
PDLIM2-204ENST00000397760 PVALEFA0A1B0GWK0 134 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 RBM47A0AV96 593 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 RHOBTB3O94955 611 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 IDEP14735 1019 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 ZNF658Q5TYW1 1059 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 UNC13DQ70J99 1090 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 DHX37Q8IY37 1157 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 ATP6V0A1Q93050 837 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 CFHR5Q9BXR6 569 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 ABHD16BQ9H3Z7 469 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 FLRT1Q9NZU1 646 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 DACH1Q9UI36 760 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 NPHP3-ACAD11A0A0J9YXS1 232 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 BACH1O14867 736 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 DKC1O60832 514 aaKnown RBP eCLIP21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 KRT18P05783 430 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 ACVR2BQ13705 512 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 TMEM63BQ5T3F8 832 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 TMC6Q7Z403 805 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 CCDC60Q8IWA6 550 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 KIF18AQ8NI77 898 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 SEPT1Q8WYJ6 367 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 COPS5Q92905 334 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 TRIM47Q96LD4 638 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 APBA2Q99767 749 aa21.43■■□□□ 1.02
PDLIM2-204ENST00000397760 PLXNA1Q9UIW2 1896 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms