RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 FAM107AO95990 144 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 GAP43P17677 238 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SCP2P22307 547 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 EIF4A3P38919 411 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 ASIC2Q16515 512 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 RRAGAQ7L523 313 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 DNAJC19Q96DA6 116 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 UBE4BO95155 1302 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 CYP3A7-CYP3A51PA0A087WV96 503 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 MYO1FO00160 1098 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 PGRMC1O00264 195 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 N4BP1O75113 896 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 CYP3A7P24462 503 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 PRDX5P30044 214 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 CDC25AP30304 524 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 MYO1EQ12965 1108 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 ALCAMQ13740 583 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 AGBL2Q5U5Z8 902 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 DENND2CQ68D51 928 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 EP400NLQ6ZTU2 488 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 MARCH10Q8NA82 808 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 CELF1Q92879 486 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 RUNDC3BQ96NL0 473 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 ISCUQ9H1K1 167 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 VCX3BQ9H321 246 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 NYAP2Q9P242 653 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 RGPD2P0DJD1 1756 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 ARAP2Q8WZ64 1704 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 IGKV6D-41A0A0C4DH26 115 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 AGPSO00116 658 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 PDE2AO00408 941 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 CREB3O43889 395 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SYF2O95926 243 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 MYBP10242 640 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 FERP16591 822 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 UAP1Q16222 522 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 GNPTABQ3T906 1256 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SLFN11Q7Z7L1 901 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SLC9A9Q8IVB4 645 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SLFN12Q8IYM2 578 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 DDX12PQ92771 950 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SETDB2Q96T68 719 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 EPB41L5Q9HCM4 733 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 CD248Q9HCU0 757 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 GDF3Q9NR23 364 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 PCDHA13Q9Y5I0 950 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 PLCH1Q4KWH8 1693 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 B4DLN1 442 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 KCNK3O14649 394 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 ZNF263O14978 683 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 NBPF5PQ86XG9 351 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 MAGEC3Q8TD91 643 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 MKL1Q969V6 931 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 PNMA5Q96PV4 448 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 FOXP3Q9BZS1 431 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 NOP53Q9NZM5 478 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SUCLA2Q9P2R7 463 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 C5orf60A6NFR6 353 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 HNRNPH1P31943 449 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 COG7P83436 770 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 ADCY1Q08828 1119 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SMYD4Q8IYR2 804 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 RAD54LQ92698 747 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 CENPTQ96BT3 561 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 IL17RBQ9NRM6 502 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 HAUS2Q9NVX0 235 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 ZNF335Q9H4Z2 1342 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 MEFVO15553 781 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SNRPFP62306 86 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 HHATQ5VTY9 493 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 CAPRIN2Q6IMN6 1127 aaKnown RBP5.92□□□□□ -1.46
PTPRD-205ENST00000397611 CCDC174Q6PII3 467 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 NEK9Q8TD19 979 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SNX29Q8TEQ0 813 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 SLC12A6Q9UHW9 1150 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 RABGAP1Q9Y3P9 1069 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 CAPN6Q9Y6Q1 641 aa5.92□□□□□ -1.46
PTPRD-205ENST00000397611 MYH15Q9Y2K3 1946 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 FAM187AA6NFU0 413 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 IRX1P78414 480 aaPredicted RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 TMED1Q13445 227 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 PPP1R2P3Q6NXS1 205 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 SCFD2Q8WU76 684 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 EYA3Q99504 573 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 DHX36Q9H2U1 1008 aaKnown RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 MTMR4Q9NYA4 1195 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 SPATA31A5Q5VU36 1347 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 SPATA31A7Q8IWB4 1347 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 PNMA6FA0A0J9YX94 578 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 CCDC169A6NNP5 214 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 TBCAO75347 108 aaKnown RBP5.91□□□□□ -1.46
PTPRD-205ENST00000397611 NUDT17P0C025 328 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 CYP27A1Q02318 531 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 GRB10Q13322 594 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 ITPK1Q13572 414 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 SLC35G1Q2M3R5 365 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 NLRP14Q86W24 1093 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 SAMD3Q8N6K7 520 aa5.91□□□□□ -1.46
PTPRD-205ENST00000397611 GBP7Q8N8V2 638 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms