RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SCAF8Q9UPN6 1271 aaKnown RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 PCDHA13Q9Y5I0 950 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 CNTNAP4Q9C0A0 1308 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 CASZ1Q86V15 1759 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 GPR75-ASB3A0A0A6YYF3 556 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 A0A1W2PQC6 194 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 POTEFA5A3E0 1075 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 PSMD14O00487 310 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 MGRN1O60291 552 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 SMNDC1O75940 238 aaKnown RBP eCLIP5.49□□□□□ -1.53
SSR1-202ENST00000397511 RTN3O95197 1032 aaPredicted RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 GDF11O95390 407 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 POTEIP0CG38 1075 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 ACTN1P12814 892 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 HOXA13P31271 388 aaPredicted RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 EPS15P42566 896 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 MAGEA1P43355 309 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 HDLBPQ00341 1268 aaKnown RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 MYO1EQ12965 1108 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 MKRN3Q13064 507 aaKnown RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 NNTQ13423 1086 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 IRF5Q13568 498 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 RAPGEF1Q13905 1077 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 TTMPQ5BVD1 217 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 KCTD16Q68DU8 428 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 POTEGQ6S5H5 508 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 POTEEQ6S8J3 1075 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 CERS5Q8N5B7 392 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 EHBP1Q8NDI1 1231 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 CCHCR1Q8TD31 782 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 ZC3H15Q8WU90 426 aaKnown RBP5.49□□□□□ -1.53
SSR1-202ENST00000397511 IFT81Q8WYA0 676 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 P3H4Q92791 437 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 CUL5Q93034 780 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 ARL8AQ96BM9 186 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 TBC1D31Q96DN5 1066 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 SPZ1Q9BXG8 430 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 PACSIN1Q9BY11 444 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 YIPF3Q9GZM5 350 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 PSTPIP2Q9H939 334 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 ADAMTS1Q9UHI8 967 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 LAMB2P55268 1798 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 SNED1Q8TER0 1413 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 IRS2Q9Y4H2 1338 aa5.49□□□□□ -1.53
SSR1-202ENST00000397511 KIAA1551Q9HCM1 1747 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 E7EVH7 732 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 UBAP1LF5GYI3 381 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 LIN7AO14910 233 aaPredicted RBP5.48□□□□□ -1.53
SSR1-202ENST00000397511 CHMP2AO43633 222 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 PPFIA2O75334 1257 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 ATP6V1G2O95670 118 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 PSMC6P62333 389 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 GUCY1A3Q02108 690 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 PABPC4Q13310 644 aaKnown RBP eCLIP5.48□□□□□ -1.539e-13■■□□□ 14
SSR1-202ENST00000397511 XRCC4Q13426 336 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 TRADDQ15628 312 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 ACCSLQ4AC99 568 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 PRR16Q569H4 304 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 ANKRD20A8PQ5CZ79 823 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 DCAF17Q5H9S7 520 aaPredicted RBP5.48□□□□□ -1.53
SSR1-202ENST00000397511 THEMIS2Q5TEJ8 643 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 MEX3CQ5U5Q3 659 aaKnown RBP5.48□□□□□ -1.53
SSR1-202ENST00000397511 C6orf89Q6UWU4 347 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 FAM133AQ8N9E0 248 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 RNPC3Q96LT9 517 aaKnown RBP5.48□□□□□ -1.53
SSR1-202ENST00000397511 C7orf25Q9BPX7 421 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 ZC3H12CQ9C0D7 883 aaKnown RBP5.48□□□□□ -1.53
SSR1-202ENST00000397511 EBF2Q9HAK2 575 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 NOD2Q9HC29 1040 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 PANK4Q9NVE7 773 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 BAIAP2L1Q9UHR4 511 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 SERPINB13Q9UIV8 391 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 C15orf41Q9Y2V0 281 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 TNRC6CQ9HCJ0 1690 aaKnown RBP5.48□□□□□ -1.53
SSR1-202ENST00000397511 WNK3Q9BYP7 1800 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 LAD1O00515 517 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 GYS1P13807 737 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 CASP5P51878 434 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 VAV2P52735 878 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 EPHB4P54760 987 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 PPP4CP60510 307 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 MTA1Q13330 715 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 LAMB3Q13751 1172 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 TBC1D10BQ4KMP7 808 aaPredicted RBP5.48□□□□□ -1.53
SSR1-202ENST00000397511 CRELD2Q6UXH1 353 aaPredicted RBP5.48□□□□□ -1.53
SSR1-202ENST00000397511 FAM114A1Q8IWE2 563 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 CYP2W1Q8TAV3 490 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 RAD54LQ92698 747 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 HAS1Q92839 578 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 MTMR8Q96EF0 704 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 AK8Q96MA6 479 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 MTMR9Q96QG7 549 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 PCDHA1Q9Y5I3 950 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 ZBTB39O15060 712 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 CLIC2O15247 247 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 USO1O60763 962 aaKnown RBP5.48□□□□□ -1.53
SSR1-202ENST00000397511 TRIM37O94972 964 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 LUC7L3O95232 432 aaKnown RBP5.48□□□□□ -1.53
SSR1-202ENST00000397511 FERP16591 822 aa5.48□□□□□ -1.53
SSR1-202ENST00000397511 NR1D1P20393 614 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms