RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SUPT20HL2P0C7V6 817 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 CYP2C9P11712 490 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 MYCLP12524 364 aaPredicted RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 CCND2P30279 289 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 TECP42680 631 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 SYKP43405 635 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 PURAQ00577 322 aaKnown RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 CCDC183Q5T5S1 534 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 PLA2G4DQ86XP0 818 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 DNERQ8NFT8 737 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 AK8Q96MA6 479 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 PDCD2LQ9BRP1 358 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 KCNMB3Q9NPA1 279 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 TRMT13Q9NUP7 481 aaKnown RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 ADD3Q9UEY8 706 aaKnown RBP14.88□□□□□ -0.03
SEC13-209ENST00000397117 KCNH3Q9ULD8 1083 aa14.88□□□□□ -0.03
SEC13-209ENST00000397117 LOC102724159A0A0B4J2E5 919 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 ZBBXA8MT70 800 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 FXR2P51116 673 aaKnown RBP eCLIP14.87□□□□□ -0.03
SEC13-209ENST00000397117 TFF2Q03403 129 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 SNW1Q13573 536 aaKnown RBP14.87□□□□□ -0.03
SEC13-209ENST00000397117 PWP2Q15269 919 aaKnown RBP14.87□□□□□ -0.03
SEC13-209ENST00000397117 FMR1NBQ8N0W7 255 aaPredicted RBP14.87□□□□□ -0.03
SEC13-209ENST00000397117 IL31RAQ8NI17 732 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 CYP2W1Q8TAV3 490 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 HAS1Q92839 578 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 LENG9Q96B70 501 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 FAM20AQ96MK3 541 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 NECAB3Q96P71 396 aaPredicted RBP14.87□□□□□ -0.03
SEC13-209ENST00000397117 IWS1Q96ST2 819 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 MPHOSPH6Q99547 160 aaKnown RBP14.87□□□□□ -0.03
SEC13-209ENST00000397117 MXRA8Q9BRK3 442 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 WDR11Q9BZH6 1224 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 TTC12Q9H892 705 aaPredicted RBP14.87□□□□□ -0.03
SEC13-209ENST00000397117 PCDHA12Q9UN75 941 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 MTCH2Q9Y6C9 303 aa14.87□□□□□ -0.03
SEC13-209ENST00000397117 IGLV3-22A0A075B6J6 115 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 FAM237AA0A1B0GTK4 181 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 B4DLN1 442 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 RFXAPO00287 272 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 MEIS1O00470 390 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 NR3C2P08235 984 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 UBA7P41226 1012 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 ALDH5A1P51649 535 aaPredicted RBP14.86□□□□□ -0.03
SEC13-209ENST00000397117 NIPA1Q7RTP0 329 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 ENGASEQ8NFI3 743 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 RASSF8Q8NHQ8 419 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 ETNPPLQ8TBG4 499 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 EPSTI1Q96J88 318 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 NUP62CLQ9H1M0 184 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 TMEM63CQ9P1W3 806 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 HPSEQ9Y251 543 aa14.86□□□□□ -0.03
SEC13-209ENST00000397117 MSH4O15457 936 aa14.85□□□□□ -0.03
SEC13-209ENST00000397117 ZNF202O95125 648 aa14.85□□□□□ -0.03
SEC13-209ENST00000397117 PDIA5Q14554 519 aa14.85□□□□□ -0.03
SEC13-209ENST00000397117 DEFB128Q7Z7B8 93 aa14.85□□□□□ -0.03
SEC13-209ENST00000397117 VSIG10LQ86VR7 867 aa14.85□□□□□ -0.03
SEC13-209ENST00000397117 MICALL1Q8N3F8 863 aa14.85□□□□□ -0.03
SEC13-209ENST00000397117 IGSF22Q8N9C0 903 aa14.85□□□□□ -0.03
SEC13-209ENST00000397117 ZFP91Q96JP5 570 aaPredicted RBP14.85□□□□□ -0.03
SEC13-209ENST00000397117 UIMC1Q96RL1 719 aa14.85□□□□□ -0.03
SEC13-209ENST00000397117 PYM1Q9BRP8 204 aaKnown RBP14.85□□□□□ -0.03
SEC13-209ENST00000397117 MTG1Q9BT17 334 aaPredicted RBP14.85□□□□□ -0.03
SEC13-209ENST00000397117 LRWD1Q9UFC0 647 aa14.85□□□□□ -0.03
SEC13-209ENST00000397117 POLR2DO15514 142 aaKnown RBP14.84□□□□□ -0.03
SEC13-209ENST00000397117 STAM2O75886 525 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 LETM1O95202 739 aaPredicted RBP14.84□□□□□ -0.03
SEC13-209ENST00000397117 CA3P07451 260 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 MYL3P08590 195 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 ITGB5P18084 799 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 RFC2P35250 354 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 CPT1AP50416 773 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 KCNQ1P51787 676 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 MRPS9P82933 396 aaKnown RBP14.84□□□□□ -0.03
SEC13-209ENST00000397117 MTMR1Q13613 665 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 AAK1Q2M2I8 961 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 NBPF20Q3BBV1 942 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 USP49Q70CQ1 688 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 NLRX1Q86UT6 975 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 PHOSPHO2Q8TCD6 241 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 GJA10Q969M2 543 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 SDF4Q9BRK5 362 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 ZNF577Q9BSK1 485 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 PANK2Q9BZ23 570 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 TNMDQ9H2S6 317 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 CLSTN2Q9H4D0 955 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 JADE2Q9NQC1 790 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 UBIAD1Q9Y5Z9 338 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 PTPRSQ13332 1948 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 TANC1Q9C0D5 1861 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 EPOPA6NHQ4 379 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 DEKP35659 375 aaKnown RBP14.84□□□□□ -0.03
SEC13-209ENST00000397117 PLA2G5P39877 138 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 PDE4DQ08499 809 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 STXBP2Q15833 593 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 CAMK4Q16566 473 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 ZSCAN23Q3MJ62 389 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 PDILTQ8N807 584 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 OR6J1Q8NGC5 347 aa14.84□□□□□ -0.03
SEC13-209ENST00000397117 CCDC34Q96HJ3 373 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms