RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 LLPHQ9BRT6 129 aaKnown RBP16.45■□□□□ 0.22
SEC13-208ENST00000397109 ZNF576Q9H609 170 aa16.45■□□□□ 0.22
SEC13-208ENST00000397109 GJB4Q9NTQ9 266 aa16.45■□□□□ 0.22
SEC13-208ENST00000397109 DDX25Q9UHL0 483 aaKnown RBP16.45■□□□□ 0.22
SEC13-208ENST00000397109 SAMM50Q9Y512 469 aa16.45■□□□□ 0.22
SEC13-208ENST00000397109 MAFBQ9Y5Q3 323 aaPredicted RBP16.45■□□□□ 0.22
SEC13-208ENST00000397109 KIF28PB7ZC32 967 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 TDP2O95551 362 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 CTSHP09668 335 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 JAK3P52333 1124 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 LETM2Q2VYF4 491 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 PLEKHG4Q58EX7 1191 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 ZNF484Q5JVG2 852 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 PPP4R3AQ6IN85 833 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 RUFY4Q6ZNE9 571 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 CKAP2LQ8IYA6 745 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 RDM1Q8NG50 284 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 SEPT8Q92599 483 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 GUCD1Q96NT3 240 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 DISC1Q9NRI5 854 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 PCDHA2Q9Y5H9 948 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 COL1A2P08123 1366 aa16.44■□□□□ 0.22
SEC13-208ENST00000397109 K7ELQ4 463 aaPredicted RBP16.43■□□□□ 0.22
SEC13-208ENST00000397109 JAK2O60674 1132 aa16.43■□□□□ 0.22
SEC13-208ENST00000397109 DTNBO60941 627 aa16.43■□□□□ 0.22
SEC13-208ENST00000397109 PSMD10O75832 226 aa16.43■□□□□ 0.22
SEC13-208ENST00000397109 WDR5P61964 334 aaKnown RBP16.43■□□□□ 0.22
SEC13-208ENST00000397109 PIK3AP1Q6ZUJ8 805 aa16.43■□□□□ 0.22
SEC13-208ENST00000397109 DBF4BQ8NFT6 615 aa16.43■□□□□ 0.22
SEC13-208ENST00000397109 OXER1Q8TDS5 423 aa16.43■□□□□ 0.22
SEC13-208ENST00000397109 DNAJB3Q8WWF6 145 aa16.43■□□□□ 0.22
SEC13-208ENST00000397109 BBXQ8WY36 941 aaPredicted RBP16.43■□□□□ 0.22
SEC13-208ENST00000397109 FAM167AQ96KS9 214 aa16.43■□□□□ 0.22
SEC13-208ENST00000397109 CDX2Q99626 313 aaPredicted RBP16.43■□□□□ 0.22
SEC13-208ENST00000397109 SLC28A3Q9HAS3 691 aa16.43■□□□□ 0.22
SEC13-208ENST00000397109 GABBR1Q9UBS5 961 aa16.43■□□□□ 0.22
SEC13-208ENST00000397109 SMIM35A0A1B0GVV1 85 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 MMP1P03956 469 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 RABGGTBP53611 331 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 HMGN5P82970 282 aaKnown RBP16.42■□□□□ 0.22
SEC13-208ENST00000397109 ST3GAL1Q11201 340 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 IER5Q5VY09 327 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 HERC6Q8IVU3 1022 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 CCDC83Q8IWF9 413 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 NME8Q8N427 588 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 ETNPPLQ8TBG4 499 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 APBB2Q92870 758 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 TMX3Q96JJ7 454 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 FAM20AQ96MK3 541 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 NKX2-4Q9H2Z4 354 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 CIZ1Q9ULV3 898 aaPredicted RBP16.42■□□□□ 0.22
SEC13-208ENST00000397109 CEP131Q9UPN4 1083 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 M0QZ92 97 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 CHRNA1P02708 482 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 ATP4AP20648 1035 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 KLRC1P26715 233 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 MRPS6P82932 125 aaKnown RBP16.42■□□□□ 0.22
SEC13-208ENST00000397109 MGAT3Q09327 533 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 SAFBQ15424 915 aaKnown RBP eCLIP16.42■□□□□ 0.226e-6■□□□□ 10.6
SEC13-208ENST00000397109 KRT40Q6A162 431 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 MTHFD1LQ6UB35 978 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 MIER3Q7Z3K6 550 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 TRAPPC12Q8WVT3 735 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 UNC45AQ9H3U1 944 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 NRBP2Q9NSY0 501 aa16.42■□□□□ 0.22
SEC13-208ENST00000397109 YBX2Q9Y2T7 364 aaKnown RBP16.42■□□□□ 0.22
SEC13-208ENST00000397109 IGSF9BQ9UPX0 1349 aa16.41■□□□□ 0.22
SEC13-208ENST00000397109 TBX3O15119 743 aa16.41■□□□□ 0.22
SEC13-208ENST00000397109 CHMP2AO43633 222 aa16.41■□□□□ 0.22
SEC13-208ENST00000397109 CCNT1O60563 726 aaKnown RBP16.41■□□□□ 0.22
SEC13-208ENST00000397109 NR5A1Q13285 461 aa16.41■□□□□ 0.22
SEC13-208ENST00000397109 TCTN1Q2MV58 587 aa16.41■□□□□ 0.22
SEC13-208ENST00000397109 DIS3L2Q8IYB7 885 aaKnown RBP16.41■□□□□ 0.22
SEC13-208ENST00000397109 IFIH1Q9BYX4 1025 aaKnown RBP16.41■□□□□ 0.22
SEC13-208ENST00000397109 FAM49AQ9H0Q0 323 aaPredicted RBP16.41■□□□□ 0.22
SEC13-208ENST00000397109 CHMP5Q9NZZ3 219 aa16.41■□□□□ 0.22
SEC13-208ENST00000397109 CDY2AQ9Y6F7 541 aa16.41■□□□□ 0.22
SEC13-208ENST00000397109 SQORQ9Y6N5 450 aa16.41■□□□□ 0.22
SEC13-208ENST00000397109 GBF1Q92538 1859 aa16.41■□□□□ 0.22
SEC13-208ENST00000397109 SLC37A4O43826 429 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 TLL1O43897 1013 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 MARCH6O60337 910 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 AMHP03971 560 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 GRIN2CQ14957 1233 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 PPP2R2DQ66LE6 453 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 B3GNT9Q6UX72 402 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 USP38Q8NB14 1042 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 TNFRSF25Q93038 417 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 ZBED2Q9BTP6 218 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 KCNMB3Q9NPA1 279 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 TRPV2Q9Y5S1 764 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 WDR81Q562E7 1941 aa16.4■□□□□ 0.22
SEC13-208ENST00000397109 BTBD18B2RXH4 712 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 MAGEB2O15479 319 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 BAG4O95429 457 aaKnown RBP16.39■□□□□ 0.21
SEC13-208ENST00000397109 GHRP10912 638 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 DEFB103AP81534 67 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 CUL4AQ13619 759 aa16.39■□□□□ 0.21
SEC13-208ENST00000397109 EARS2Q5JPH6 523 aaKnown RBP16.39■□□□□ 0.21
SEC13-208ENST00000397109 FBXO47Q5MNV8 452 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms