RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 ZRSR1Q15695 479 aaKnown RBP16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 DPCR1Q3MIW9 517 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 NAALADL2Q58DX5 795 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 RRAGBQ5VZM2 374 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 ABHD15Q6UXT9 468 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 KRBA2Q6ZNG9 492 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 TRPV1Q8NER1 839 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 RASSF8Q8NHQ8 419 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 DYDC2Q96IM9 177 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 CDK5RAP3Q96JB5 506 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 IMPACTQ9P2X3 320 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 POTEB3A0JP26 581 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 ACTN4O43707 911 aaKnown RBP16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 P4HBP07237 508 aaKnown RBP16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 ELNP15502 786 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 TNFAIP2Q03169 654 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 ARID5BQ14865 1188 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 LONRF3Q496Y0 759 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 MAP3K21Q5TCX8 1036 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 POTEBQ6S5H4 581 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 SLAIN1Q8ND83 568 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 LRRC15Q8TF66 581 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 DHX58Q96C10 678 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 CUEDC2Q9H467 287 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 RGL1Q9NZL6 768 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 STK17AQ9UEE5 414 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 FAM184BQ9ULE4 1060 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 GNEQ9Y223 722 aaKnown RBP16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 TELO2Q9Y4R8 837 aa16.53■□□□□ 0.24
TM9SF1-202ENST00000396854 FRMPD3Q5JV73 1810 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 IGKV6D-21A0A0A0MT36 114 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 GSTTP1A0A1W2PQM5 241 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 SORBS3O60504 671 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 PSAPP07602 524 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 SUPT20HL2P0C7V6 817 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 HSPA8P11142 646 aaKnown RBP16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 SKILP12757 684 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 AKR1A1P14550 325 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 STAT6P42226 847 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 CYP4A11Q02928 519 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 CACNB2Q08289 660 aaPredicted RBP16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 HSDL1Q3SXM5 330 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 MIS18BP1Q6P0N0 1132 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 PDXDC2PQ6P474 469 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 GPR20Q99678 358 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 LXNQ9BS40 222 aa16.52■□□□□ 0.24
TM9SF1-202ENST00000396854 SLFN14P0C7P3 912 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 SP4Q02446 784 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 TRIM32Q13049 653 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 GJC2Q5T442 439 aaPredicted RBP16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 NYAP1Q6ZVC0 841 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 SEPT1Q8WYJ6 367 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 SPATA33Q96N06 139 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 MAGEF1Q9HAY2 307 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 SERTAD1Q9UHV2 236 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 KIAA1024Q9UPX6 916 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 Q9Y3F1 56 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 HTTP42858 3142 aa16.52■□□□□ 0.23
TM9SF1-202ENST00000396854 IGSF9BQ9UPX0 1349 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 POTEFA5A3E0 1075 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 FOXN1O15353 648 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 LYPLA2O95372 231 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 QARSP47897 775 aaKnown RBP16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 CTTNQ14247 550 aaKnown RBP16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 POTEGQ6S5H5 508 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 CCDC60Q8IWA6 550 aaPredicted RBP16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 BANK1Q8NDB2 785 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 CNNM3Q8NE01 707 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 PPTC7Q8NI37 304 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 PLIN2Q99541 437 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 ZSWIM4Q9H7M6 989 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 BLOC1S4Q9NUP1 217 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 TUBE1Q9UJT0 475 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 PTCH2Q9Y6C5 1203 aa16.51■□□□□ 0.23
TM9SF1-202ENST00000396854 NOP56O00567 594 aaKnown RBP16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 SEPT4O43236 478 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 PRKAR2AP13861 404 aaKnown RBP16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 PSMC5P62195 406 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 CEP135Q66GS9 1140 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 KANK3Q6NY19 840 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 KCNK18Q7Z418 384 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 FILIP1Q7Z7B0 1213 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 TPH2Q8IWU9 490 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 PDCL2Q8N4E4 241 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 OR6J1Q8NGC5 347 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 WRAP73Q9P2S5 460 aaPredicted RBP16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 HOOK1Q9UJC3 728 aaKnown RBP16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 PTPN22Q9Y2R2 807 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 DKC1O60832 514 aaKnown RBP eCLIP16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 LGR5O75473 907 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 HOXD8P13378 290 aaPredicted RBP16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 GRK4P32298 578 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 TCF7P36402 384 aaPredicted RBP16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 TPM4P67936 248 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 DHX8Q14562 1220 aaKnown RBP16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 UGCGQ16739 394 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 SH3RF1Q7Z6J0 888 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 C4orf19Q8IY42 314 aa16.5■□□□□ 0.23
TM9SF1-202ENST00000396854 CCDC112Q8NEF3 446 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms