RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 SETQ01105 290 aaPredicted RBP12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 NSMFQ6X4W1 530 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 BANK1Q8NDB2 785 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 TUFT1Q9NNX1 390 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 SNX12Q9UMY4 172 aa12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 SCAF8Q9UPN6 1271 aaKnown RBP12.67□□□□□ -0.38
PDXDC1-202ENST00000396410 K7ENM7 598 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 NKRFO15226 690 aaKnown RBP eCLIP12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 FTCDO95954 541 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 ACTN1P12814 892 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 MCF2L2Q86YR7 1114 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 TRIM59Q8IWR1 403 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 FUT8Q9BYC5 575 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 BZW2Q9Y6E2 419 aaKnown RBP12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 CAPN6Q9Y6Q1 641 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 EHHADHQ08426 723 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 SIAH1Q8IUQ4 282 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 LMBR1Q8WVP7 490 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 PKNOX2Q96KN3 472 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 OSBPL9Q96SU4 736 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 FBXO28Q9NVF7 368 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 GJA3Q9Y6H8 435 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 YDJCA8MPS7 323 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 SASH3O75995 380 aa12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.66□□□□□ -0.38
PDXDC1-202ENST00000396410 RASSF10A6NK89 507 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 IPO5O00410 1097 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 SLC9A1P19634 815 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 CASP5P51878 434 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 APBA1Q02410 837 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 TNFAIP1Q13829 316 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 PTPROQ16827 1216 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 SELENOOQ9BVL4 669 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 SUGCTQ9HAC7 445 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 EDIL3O43854 480 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 PALMO75781 387 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 STAT1P42224 750 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 KCNMA1Q12791 1236 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 ARSHQ5FYA8 562 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 RINT1Q6NUQ1 792 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 U2AF1L4Q8WU68 220 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 HNRNPLLQ8WVV9 542 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 IFT81Q8WYA0 676 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 PLEKHA4Q9H4M7 779 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 CWC15Q9P013 229 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 LARSQ9P2J5 1176 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 ZNRF3Q9ULT6 936 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 FAM170AA1A519 330 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 EML1O00423 815 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 ZBED4O75132 1171 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 AMPD2Q01433 879 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 RPS6KA1Q15418 735 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 RNF10Q8N5U6 811 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 LXNQ9BS40 222 aa12.65□□□□□ -0.38
PDXDC1-202ENST00000396410 SPATA31C1P0DKV0 1188 aa12.65□□□□□ -0.39
PDXDC1-202ENST00000396410 GYS2P54840 703 aa12.65□□□□□ -0.39
PDXDC1-202ENST00000396410 MRPS25P82663 173 aaKnown RBP12.65□□□□□ -0.39
PDXDC1-202ENST00000396410 ARHGAP44Q17R89 818 aa12.65□□□□□ -0.39
PDXDC1-202ENST00000396410 ZC2HC1CQ53FD0 456 aaPredicted RBP12.65□□□□□ -0.39
PDXDC1-202ENST00000396410 BEND6Q5SZJ8 279 aaPredicted RBP12.65□□□□□ -0.39
PDXDC1-202ENST00000396410 CIAPIN1Q6FI81 312 aa12.65□□□□□ -0.39
PDXDC1-202ENST00000396410 BTNL9Q6UXG8 535 aa12.65□□□□□ -0.39
PDXDC1-202ENST00000396410 CIITAP33076 1130 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 JAG1P78504 1218 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 SLC18A3Q16572 532 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 SND1Q7KZF4 910 aaKnown RBP eCLIP12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 GOLGA5Q8TBA6 731 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 SYN2Q92777 582 aaPredicted RBP12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 HNRNPH3P31942 346 aaKnown RBP12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 HLTFQ14527 1009 aaKnown RBP eCLIP12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 ZNF662Q6ZS27 426 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 BAP1Q92560 729 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 GFPT2O94808 682 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 UCHL3P15374 230 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 DPEP1P16444 411 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 CAP2P40123 477 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 BAG6P46379 1132 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 PRPF4BQ13523 1007 aaKnown RBP12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 EPHA7Q15375 998 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 KCTD10Q9H3F6 313 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 RAVER2Q9HCJ3 691 aaKnown RBP12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 RAB21Q9UL25 225 aa12.64□□□□□ -0.39
PDXDC1-202ENST00000396410 KCNK3O14649 394 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 CYP3A4P08684 503 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 CAPN2P17655 700 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 EIF2AK2P19525 551 aaKnown RBP12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 TNNC1P63316 161 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 SP4Q02446 784 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 SKIDA1Q1XH10 827 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 ZCWPW2Q504Y3 356 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 FOXR2Q6PJQ5 311 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 KSR1Q8IVT5 923 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 GSPT2Q8IYD1 628 aaKnown RBP12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 CEP89Q96ST8 783 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 CCDC169A6NNP5 214 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 TNFAIP3P21580 790 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 SLC7A5Q01650 507 aa12.63□□□□□ -0.39
PDXDC1-202ENST00000396410 RRP1BQ14684 758 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms