RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PARVGQ9HBI0 331 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 RNF146Q9NTX7 359 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 WRAP73Q9P2S5 460 aaPredicted RBP16.48■□□□□ 0.23
CBX3-202ENST00000396386 PLAGL2Q9UPG8 496 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 ASTN1O14525 1302 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 OTOFQ9HC10 1997 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 CTAGE9A4FU28 777 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 SLC16A3O15427 465 aaKnown RBP16.48■□□□□ 0.23
CBX3-202ENST00000396386 TADA3O75528 432 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 MRPS9P82933 396 aaKnown RBP16.48■□□□□ 0.23
CBX3-202ENST00000396386 PPP2R3AQ06190 1150 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 PDXDC1Q6P996 788 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 RNF207Q6ZRF8 634 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 ZNF662Q6ZS27 426 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 STXBP4Q6ZWJ1 553 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 CACNA2D4Q7Z3S7 1137 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 MYCT1Q8N699 235 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 TAAR1Q96RJ0 339 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 CEP72Q9P209 647 aa16.48■□□□□ 0.23
CBX3-202ENST00000396386 ZMYM2Q9UBW7 1377 aa16.47■□□□□ 0.23
CBX3-202ENST00000396386 C19orf81C9J6K1 198 aa16.47■□□□□ 0.23
CBX3-202ENST00000396386 RPL13P26373 211 aaKnown RBP16.47■□□□□ 0.23
CBX3-202ENST00000396386 ZNF131P52739 623 aa16.47■□□□□ 0.23
CBX3-202ENST00000396386 OAZ1P54368 228 aa16.47■□□□□ 0.23
CBX3-202ENST00000396386 HMGCS2P54868 508 aa16.47■□□□□ 0.23
CBX3-202ENST00000396386 KCNMA1Q12791 1236 aa16.47■□□□□ 0.23
CBX3-202ENST00000396386 PRAMEF18Q5VWM3 479 aa16.47■□□□□ 0.23
CBX3-202ENST00000396386 FRMD5Q7Z6J6 570 aa16.47■□□□□ 0.23
CBX3-202ENST00000396386 BAP1Q92560 729 aa16.47■□□□□ 0.23
CBX3-202ENST00000396386 NAPGQ99747 312 aaPredicted RBP16.47■□□□□ 0.23
CBX3-202ENST00000396386 LSM14BQ9BX40 385 aaKnown RBP16.47■□□□□ 0.23
CBX3-202ENST00000396386 PXMP2Q9NR77 195 aa16.47■□□□□ 0.23
CBX3-202ENST00000396386 LRRC53A6NM62 1247 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 EFCAB8A8MWE9 144 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 ZBTB39O15060 712 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 DHX15O43143 795 aaKnown RBP16.46■□□□□ 0.23
CBX3-202ENST00000396386 NR3C1P04150 777 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 P4HBP07237 508 aaKnown RBP16.46■□□□□ 0.23
CBX3-202ENST00000396386 LMNB1P20700 586 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 GUCY2CP25092 1073 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 ITGB3BPQ13352 177 aaPredicted RBP16.46■□□□□ 0.23
CBX3-202ENST00000396386 TUBB2AQ13885 445 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
CBX3-202ENST00000396386 NSMFQ6X4W1 530 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 RRAGAQ7L523 313 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 CCDC155Q8N6L0 562 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 EHBP1Q8NDI1 1231 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 JAKMIP2Q96AA8 810 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 CCDC42Q96M95 316 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 RMDN3Q96TC7 470 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 PDCD2LQ9BRP1 358 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 TUBB2BQ9BVA1 445 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 NUCKS1Q9H1E3 243 aaKnown RBP16.46■□□□□ 0.23
CBX3-202ENST00000396386 TBC1D22BQ9NU19 505 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 ARMCX3Q9UH62 379 aaPredicted RBP16.46■□□□□ 0.23
CBX3-202ENST00000396386 ZHX2Q9Y6X8 837 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 PTPRFP10586 1907 aa16.46■□□□□ 0.23
CBX3-202ENST00000396386 KRT86O43790 486 aa16.46■□□□□ 0.22
CBX3-202ENST00000396386 EPB41P11171 864 aaKnown RBP16.46■□□□□ 0.22
CBX3-202ENST00000396386 YY1P25490 414 aa16.46■□□□□ 0.22
CBX3-202ENST00000396386 ERCC6LQ2NKX8 1250 aa16.46■□□□□ 0.22
CBX3-202ENST00000396386 REPS2Q8NFH8 660 aa16.46■□□□□ 0.22
CBX3-202ENST00000396386 UBXN4Q92575 508 aa16.46■□□□□ 0.22
CBX3-202ENST00000396386 KLRG1Q96E93 195 aa16.46■□□□□ 0.22
CBX3-202ENST00000396386 WNK4Q96J92 1243 aa16.46■□□□□ 0.22
CBX3-202ENST00000396386 ZSWIM4Q9H7M6 989 aa16.46■□□□□ 0.22
CBX3-202ENST00000396386 TMOD4Q9NZQ9 345 aa16.46■□□□□ 0.22
CBX3-202ENST00000396386 GUCA1BQ9UMX6 200 aa16.46■□□□□ 0.22
CBX3-202ENST00000396386 ARID2Q68CP9 1835 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 A0A0G2JMZ2 1700 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 SFI1A8K8P3 1242 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 ABL1P00519 1130 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 MYCLP12524 364 aaPredicted RBP16.45■□□□□ 0.22
CBX3-202ENST00000396386 NMT1P30419 496 aaKnown RBP16.45■□□□□ 0.22
CBX3-202ENST00000396386 DSG3P32926 999 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 SPA17Q15506 151 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 NFIL3Q16649 462 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 CCDC122Q5T0U0 273 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 ARHGEF16Q5VV41 709 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 SNRNP48Q6IEG0 339 aaKnown RBP16.45■□□□□ 0.22
CBX3-202ENST00000396386 XRRA1Q6P2D8 792 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 METTL14Q9HCE5 456 aaKnown RBP16.45■□□□□ 0.22
CBX3-202ENST00000396386 POLD4Q9HCU8 107 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 ARHGAP20Q9P2F6 1191 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 TRIM10Q9UDY6 481 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 TCEAL9Q9UHQ7 104 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 FZD1Q9UP38 647 aa16.45■□□□□ 0.22
CBX3-202ENST00000396386 WDR81Q562E7 1941 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 KIAA1217Q5T5P2 1943 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 CCND2P30279 289 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 VAV2P52735 878 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 KCNH2Q12809 1159 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 SUPT20HL1Q3ZLR7 823 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 FAM178BQ8IXR5 827 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 TSGA10Q9BZW7 698 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 DEF6Q9H4E7 631 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 BCAS3Q9H6U6 928 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 DBR1Q9UK59 544 aaKnown RBP16.44■□□□□ 0.22
CBX3-202ENST00000396386 SAMM50Q9Y512 469 aa16.44■□□□□ 0.22
CBX3-202ENST00000396386 LCTP09848 1927 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms