RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TRIP12Q14669 1992 aaPredicted RBP21.55■■□□□ 1.04
HOXA9-202ENST00000396345 RRN3P2A6NIE6 340 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 OATP04181 439 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 CYP2C9P11712 490 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 IGBP1P78318 339 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 CYP4A11Q02928 519 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 PDIA5Q14554 519 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 FOXD4L6Q3SYB3 417 aaPredicted RBP21.54■■□□□ 1.04
HOXA9-202ENST00000396345 FOXD4L3Q6VB84 417 aaPredicted RBP21.54■■□□□ 1.04
HOXA9-202ENST00000396345 ERMNQ8TAM6 284 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 NEK9Q8TD19 979 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 LMBR1Q8WVP7 490 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 LXNQ9BS40 222 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 TSHZ2Q9NRE2 1034 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 LRWD1Q9UFC0 647 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 TBX21Q9UL17 535 aa21.54■■□□□ 1.04
HOXA9-202ENST00000396345 ZMYND8Q9ULU4 1186 aaPredicted RBP21.54■■□□□ 1.04
HOXA9-202ENST00000396345 TRIM43BA6NCK2 446 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 KIAA0355O15063 1070 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 TREHO43280 583 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 SLITRK3O94933 977 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 CTTNQ14247 550 aaKnown RBP21.53■■□□□ 1.04
HOXA9-202ENST00000396345 PTPAQ15257 358 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 XKR3Q5GH77 459 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 ZNF484Q5JVG2 852 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 TPH2Q8IWU9 490 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 IGSF22Q8N9C0 903 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 TRIM43Q96BQ3 446 aaPredicted RBP21.53■■□□□ 1.04
HOXA9-202ENST00000396345 CTAGE1Q96RT6 745 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 HSD17B14Q9BPX1 270 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 ZSWIM4Q9H7M6 989 aa21.53■■□□□ 1.04
HOXA9-202ENST00000396345 RBM19Q9Y4C8 960 aaKnown RBP21.53■■□□□ 1.04
HOXA9-202ENST00000396345 CEP290O15078 2479 aa21.52■■□□□ 1.04
HOXA9-202ENST00000396345 COL1A2P08123 1366 aa21.52■■□□□ 1.04
HOXA9-202ENST00000396345 VWA3AA6NCI4 1184 aa21.52■■□□□ 1.04
HOXA9-202ENST00000396345 DDX11L8A8MPP1 907 aa21.52■■□□□ 1.04
HOXA9-202ENST00000396345 SYN1P17600 705 aa21.52■■□□□ 1.04
HOXA9-202ENST00000396345 ADAM17P78536 824 aa21.52■■□□□ 1.04
HOXA9-202ENST00000396345 PTK7Q13308 1070 aa21.52■■□□□ 1.04
HOXA9-202ENST00000396345 TRAPPC12Q8WVT3 735 aa21.52■■□□□ 1.04
HOXA9-202ENST00000396345 WRAP73Q9P2S5 460 aaPredicted RBP21.52■■□□□ 1.04
HOXA9-202ENST00000396345 TFIP11Q9UBB9 837 aaKnown RBP21.52■■□□□ 1.04
HOXA9-202ENST00000396345 STBD1O95210 358 aa21.51■■□□□ 1.03
HOXA9-202ENST00000396345 DDIT3P35638 169 aa21.51■■□□□ 1.03
HOXA9-202ENST00000396345 NASPP49321 788 aaPredicted RBP21.51■■□□□ 1.03
HOXA9-202ENST00000396345 NUCB2P80303 420 aa21.51■■□□□ 1.03
HOXA9-202ENST00000396345 MARCH8Q5T0T0 291 aa21.51■■□□□ 1.03
HOXA9-202ENST00000396345 SERINC5Q86VE9 423 aa21.51■■□□□ 1.03
HOXA9-202ENST00000396345 C4orf19Q8IY42 314 aa21.51■■□□□ 1.03
HOXA9-202ENST00000396345 POLR3CQ9BUI4 534 aaPredicted RBP21.51■■□□□ 1.03
HOXA9-202ENST00000396345 HIPK3Q9H422 1215 aa21.51■■□□□ 1.03
HOXA9-202ENST00000396345 TUFT1Q9NNX1 390 aa21.51■■□□□ 1.03
HOXA9-202ENST00000396345 SEPT9Q9UHD8 586 aaPredicted RBP21.51■■□□□ 1.03
HOXA9-202ENST00000396345 TUBE1Q9UJT0 475 aa21.51■■□□□ 1.03
HOXA9-202ENST00000396345 STK24Q9Y6E0 443 aa21.51■■□□□ 1.03
HOXA9-202ENST00000396345 ZBTB42B2RXF5 422 aa21.5■■□□□ 1.03
HOXA9-202ENST00000396345 RAG1P15918 1043 aa21.5■■□□□ 1.03
HOXA9-202ENST00000396345 MARCKSP29966 332 aaPredicted RBP21.5■■□□□ 1.03
HOXA9-202ENST00000396345 SLC39A14Q15043 492 aa21.5■■□□□ 1.03
HOXA9-202ENST00000396345 STK38Q15208 465 aa21.5■■□□□ 1.03
HOXA9-202ENST00000396345 HAUS3Q68CZ6 603 aa21.5■■□□□ 1.03
HOXA9-202ENST00000396345 ATL3Q6DD88 541 aa21.5■■□□□ 1.03
HOXA9-202ENST00000396345 CATSPER3Q86XQ3 398 aa21.5■■□□□ 1.03
HOXA9-202ENST00000396345 CCDC155Q8N6L0 562 aa21.5■■□□□ 1.03
HOXA9-202ENST00000396345 NOC4LQ9BVI4 516 aaKnown RBP21.5■■□□□ 1.03
HOXA9-202ENST00000396345 NIFKQ9BYG3 293 aaKnown RBP21.5■■□□□ 1.03
HOXA9-202ENST00000396345 PPP1R12CQ9BZL4 782 aa21.5■■□□□ 1.03
HOXA9-202ENST00000396345 MBLAC1A4D2B0 266 aaPredicted RBP21.49■■□□□ 1.03
HOXA9-202ENST00000396345 H0YGN5 161 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 MED24O75448 989 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 LYPLA2O95372 231 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 TIMP1P01033 207 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 SPATA31C1P0DKV0 1188 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 RPA1P27694 616 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 CCT6AP40227 531 aaKnown RBP21.49■■□□□ 1.03
HOXA9-202ENST00000396345 BFSP2Q13515 415 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 KRT79Q5XKE5 535 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 MTHFD1LQ6UB35 978 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 ANO5Q75V66 913 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 CAGE1Q8TC20 777 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 DHX38Q92620 1227 aaKnown RBP21.49■■□□□ 1.03
HOXA9-202ENST00000396345 ATP6V1DQ9Y5K8 247 aa21.49■■□□□ 1.03
HOXA9-202ENST00000396345 TMEM150BA6NC51 233 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 PP2D1A8MPX8 630 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 ITGB8P26012 769 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 KLRC1P26715 233 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 CDC25AP30304 524 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 YWHABP31946 246 aaKnown RBP21.48■■□□□ 1.03
HOXA9-202ENST00000396345 DNM1Q05193 864 aaKnown RBP21.48■■□□□ 1.03
HOXA9-202ENST00000396345 MTERF2Q49AM1 385 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 RUFY4Q6ZNE9 571 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 OTUD6AQ7L8S5 288 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 LINC00301Q8NCQ3 95 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 SNX29Q8TEQ0 813 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 WNT8BQ93098 351 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 ZBTB10Q96DT7 871 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 AK8Q96MA6 479 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 PCDH10Q9P2E7 1040 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 CFAP45Q9UL16 551 aa21.48■■□□□ 1.03
HOXA9-202ENST00000396345 PCDHA2Q9Y5H9 948 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms