RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 TBX2Q13207 712 aaPredicted RBP13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 KCNJ12Q14500 433 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 NEDD9Q14511 834 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 KRT31Q15323 416 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 CSGALNACT2Q8N6G5 542 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 SMCR8Q8TEV9 937 aaPredicted RBP13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 SCFD1Q8WVM8 642 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 ATP6V0A1Q93050 837 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 KCTD10Q9H3F6 313 aa13.18□□□□□ -0.3
GTF2A2-202ENST00000396060 ASB14A6NK59 587 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 EIF3DO15371 548 aaKnown RBP eCLIP13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 TBCAO75347 108 aaKnown RBP13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 PTGS1P23219 599 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 YWHABP31946 246 aaKnown RBP13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 COPB1P53618 953 aaKnown RBP13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 INHBEP58166 350 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 ACTR2P61160 394 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 FAM110CQ1W6H9 321 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 EDRF1Q3B7T1 1238 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 ZNF792Q3KQV3 632 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 MIS18BP1Q6P0N0 1132 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 PADI6Q6TGC4 694 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 RASAL3Q86YV0 1011 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 TSG101Q99816 390 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 PORCNQ9H237 461 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 KCNF1Q9H3M0 494 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 PARVGQ9HBI0 331 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 TRAF3IP3Q9Y228 551 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 DIS3Q9Y2L1 958 aaKnown RBP13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
GTF2A2-202ENST00000396060 UBE4BO95155 1302 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 ITIH6Q6UXX5 1313 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 ADGRA2Q96PE1 1338 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 PDXKO00764 312 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 ZNF500O60304 480 aaPredicted RBP13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 SUPT20HL2P0C7V6 817 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 MAPK7Q13164 816 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 LRRC41Q15345 812 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 NFIL3Q16649 462 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 UGCGQ16739 394 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 SPECC1LQ69YQ0 1117 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 LRRC55Q6ZSA7 311 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 OTUD6AQ7L8S5 288 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 TMC6Q7Z403 805 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 SAPCD2Q86UD0 394 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 SFR1Q86XK3 245 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 LRRC8AQ8IWT6 810 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 CCDC150Q8NCX0 1101 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 GLIS3Q8NEA6 775 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 CEP63Q96MT8 703 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 STRA6Q9BX79 667 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 EFCC1Q9HA90 598 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 MAFBQ9Y5Q3 323 aaPredicted RBP13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 SYNGAP1Q96PV0 1343 aa13.16□□□□□ -0.3
GTF2A2-202ENST00000396060 COBLO75128 1261 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 FAM13AO94988 1023 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 PGK2P07205 417 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 MARSP56192 900 aaKnown RBP13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 FKBP3Q00688 224 aaKnown RBP13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 KNOP1Q1ED39 458 aaKnown RBP13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 RGMBQ6NW40 437 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 CCDC62Q6P9F0 684 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 METTL7BQ6UX53 244 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 FILIP1Q7Z7B0 1213 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 DAW1Q8N136 415 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 ANKRD13CQ8N6S4 541 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 CACTINQ8WUQ7 758 aaKnown RBP13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 TMEM174Q8WUU8 243 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 FGFBP2Q9BYJ0 223 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 ST6GALNAC4Q9H4F1 302 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 BCAS3Q9H6U6 928 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 PDLIM7Q9NR12 457 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 MAGEC2Q9UBF1 373 aaPredicted RBP13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 DDX41Q9UJV9 622 aaKnown RBP13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 LRRC37A2A6NM11 1700 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 IGSF9BQ9UPX0 1349 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 A0A1W2PQC6 194 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 RSPH10B2B2RC85 870 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 N4BP3O15049 544 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 ZNF862O60290 1169 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 GNA14O95837 355 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 RSPH10BP0C881 870 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 UBA1P22314 1058 aaKnown RBP13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 MAPK4P31152 587 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 HOXD13P35453 343 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 ZNF157P51786 506 aaPredicted RBP13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 RAD51AP2Q09MP3 1159 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 ALCAMQ13740 583 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 HSP90AA4PQ58FG1 418 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 XKR3Q5GH77 459 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 SWSAP1Q6NVH7 229 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 MAMDC4Q6UXC1 1216 aa13.15□□□□□ -0.3
GTF2A2-202ENST00000396060 SEPT14Q6ZU15 432 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms