RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 KIF5CO60282 957 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 IRX5P78411 483 aaPredicted RBP13.39□□□□□ -0.27
ITGB1-202ENST00000396033 BAATQ14032 418 aaPredicted RBP13.39□□□□□ -0.27
ITGB1-202ENST00000396033 SMCR8Q8TEV9 937 aaPredicted RBP13.39□□□□□ -0.27
ITGB1-202ENST00000396033 PURBQ96QR8 312 aaKnown RBP13.39□□□□□ -0.27
ITGB1-202ENST00000396033 PARVGQ9HBI0 331 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 DHX15O43143 795 aaKnown RBP13.39□□□□□ -0.27
ITGB1-202ENST00000396033 COG2Q14746 738 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 BMT2Q1RMZ1 405 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 ERO1AQ96HE7 468 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 IRX2Q9BZI1 471 aaPredicted RBP13.39□□□□□ -0.27
ITGB1-202ENST00000396033 TRAF3IP3Q9Y228 551 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.39□□□□□ -0.27
ITGB1-202ENST00000396033 COL11A1P12107 1806 aaPredicted RBP13.39□□□□□ -0.27
ITGB1-202ENST00000396033 EPHB6O15197 1021 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 HOXD13P35453 343 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 OAZ1P54368 228 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 MARSP56192 900 aaKnown RBP13.39□□□□□ -0.27
ITGB1-202ENST00000396033 CCDC155Q8N6L0 562 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.39□□□□□ -0.27
ITGB1-202ENST00000396033 KCND2Q9NZV8 630 aa13.39□□□□□ -0.27
ITGB1-202ENST00000396033 TESPA1A2RU30 521 aaPredicted RBP13.38□□□□□ -0.27
ITGB1-202ENST00000396033 PDXKO00764 312 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 P4HBP07237 508 aaKnown RBP13.38□□□□□ -0.27
ITGB1-202ENST00000396033 TRIM59Q8IWR1 403 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 TBC1D22BQ9NU19 505 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 TYW1Q9NV66 732 aaKnown RBP13.38□□□□□ -0.27
ITGB1-202ENST00000396033 FAM53CQ9NYF3 392 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 RNF181Q9P0P0 153 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 AFG3L2Q9Y4W6 797 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 RLFQ13129 1914 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 TMEM132BQ14DG7 1078 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 CATSPERGQ6ZRH7 1159 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 NEK11Q8NG66 645 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 ZSWIM4Q9H7M6 989 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 TCEAL9Q9UHQ7 104 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 ZNF214Q9UL59 606 aaPredicted RBP13.38□□□□□ -0.27
ITGB1-202ENST00000396033 SBF1O95248 1867 aa13.38□□□□□ -0.27
ITGB1-202ENST00000396033 NMT1P30419 496 aaKnown RBP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 CYLC1P35663 651 aaPredicted RBP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 ADARB2Q9NS39 739 aaKnown RBP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 ODF2LQ9ULJ1 636 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 V9GYY5 206 aaPredicted RBP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 ASTN1O14525 1302 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 EIF3DO15371 548 aaKnown RBP eCLIP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 USP2O75604 605 aaPredicted RBP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 CAPN2P17655 700 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 PDE4CQ08493 712 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 NHEJ1Q9H9Q4 299 aaPredicted RBP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 FAM184BQ9ULE4 1060 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 ADAMTS5Q9UNA0 930 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 LOXHD1Q8IVV2 1947 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 CCND2P30279 289 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 PLS1Q14651 629 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 DLK2Q6UY11 383 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 SEL1LQ9UBV2 794 aa13.37□□□□□ -0.27
ITGB1-202ENST00000396033 DDX41Q9UJV9 622 aaKnown RBP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 REXO2Q9Y3B8 237 aaKnown RBP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 POLR2AP24928 1970 aaKnown RBP13.37□□□□□ -0.27
ITGB1-202ENST00000396033 NR3C1P04150 777 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 KCNA1Q09470 495 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 VGLL4Q14135 290 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 ZNF569Q5MCW4 686 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 CACNA2D4Q7Z3S7 1137 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 FAM178BQ8IXR5 827 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 IPO7O95373 1038 aaKnown RBP13.36□□□□□ -0.27
ITGB1-202ENST00000396033 GUCY2CP25092 1073 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 RPL13P26373 211 aaKnown RBP13.36□□□□□ -0.27
ITGB1-202ENST00000396033 ARHGAP25P42331 645 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 ZNF131P52739 623 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 KCNMA1Q12791 1236 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 ODR4Q5SWX8 454 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 DCPSQ96C86 337 aaKnown RBP13.36□□□□□ -0.27
ITGB1-202ENST00000396033 LSM14BQ9BX40 385 aaKnown RBP13.36□□□□□ -0.27
ITGB1-202ENST00000396033 ARMCX3Q9UH62 379 aaPredicted RBP13.36□□□□□ -0.27
ITGB1-202ENST00000396033 SNCAIPQ9Y6H5 919 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 SPDYE16A6NNV3 312 aaPredicted RBP13.36□□□□□ -0.27
ITGB1-202ENST00000396033 ADM5C9JUS6 153 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 QARSP47897 775 aaKnown RBP13.36□□□□□ -0.27
ITGB1-202ENST00000396033 ZC2HC1CQ53FD0 456 aaPredicted RBP13.36□□□□□ -0.27
ITGB1-202ENST00000396033 XRRA1Q6P2D8 792 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 RRAGAQ7L523 313 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 SULF1Q8IWU6 871 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 CCDC170Q8IYT3 715 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 CCDC43Q96MW1 224 aaKnown RBP13.36□□□□□ -0.27
ITGB1-202ENST00000396033 ACAD9Q9H845 621 aa13.36□□□□□ -0.27
ITGB1-202ENST00000396033 LRRC53A6NM62 1247 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 CLIC2O15247 247 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 ATP9AO75110 1047 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 HIP1RO75146 1068 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 NR3C2P08235 984 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 KRT83P78385 493 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 MAP3K9P80192 1104 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 CDK17Q00537 523 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.35□□□□□ -0.27
ITGB1-202ENST00000396033 STXBP4Q6ZWJ1 553 aa13.35□□□□□ -0.27
ITGB1-202ENST00000396033 FRMD5Q7Z6J6 570 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms