RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 GNAT2P19087 354 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 RGS19P49795 217 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 LBX1P52954 281 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 AK2P54819 239 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 TIMM10P62072 90 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 BYSLQ13895 437 aaKnown RBP9.67□□□□□ -0.86
MSH5-205ENST00000395853 COL9A3Q14050 684 aaPredicted RBP9.67□□□□□ -0.86
MSH5-205ENST00000395853 NECTIN1Q15223 517 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 RASIP1Q5U651 963 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 AGAP9Q5VTM2 703 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 PPP4R3AQ6IN85 833 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 CYP26C1Q6V0L0 522 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 FERMT3Q86UX7 667 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 MAP7D3Q8IWC1 876 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 SYNE4Q8N205 404 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 DCLK2Q8N568 766 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 GBP5Q96PP8 586 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 NAPGQ99747 312 aaPredicted RBP9.67□□□□□ -0.86
MSH5-205ENST00000395853 METTL14Q9HCE5 456 aaKnown RBP9.67□□□□□ -0.86
MSH5-205ENST00000395853 DIS3Q9Y2L1 958 aaKnown RBP9.67□□□□□ -0.86
MSH5-205ENST00000395853 COMMD3-BMI1R4GMX3 469 aa9.67□□□□□ -0.86
MSH5-205ENST00000395853 EPHX2P34913 555 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 SERPINB4P48594 390 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 HLFQ16534 295 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 SHROOM1Q2M3G4 852 aaPredicted RBP9.66□□□□□ -0.86
MSH5-205ENST00000395853 KLC3Q6P597 504 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 ZNF589Q86UQ0 364 aaPredicted RBP9.66□□□□□ -0.86
MSH5-205ENST00000395853 GSPT2Q8IYD1 628 aaKnown RBP9.66□□□□□ -0.86
MSH5-205ENST00000395853 STKLD1Q8NE28 680 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 HAUS1Q96CS2 278 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 FAM89AQ96GI7 184 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 NEUROD6Q96NK8 337 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 HAPLN3Q96S86 360 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 HNRNPABQ99729 332 aaKnown RBP9.66□□□□□ -0.86
MSH5-205ENST00000395853 DESI2Q9BSY9 194 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 NAA15Q9BXJ9 866 aaKnown RBP9.66□□□□□ -0.86
MSH5-205ENST00000395853 MIS12Q9H081 205 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 ZNF219Q9P2Y4 722 aaPredicted RBP9.66□□□□□ -0.86
MSH5-205ENST00000395853 SLC12A4Q9UP95 1085 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 HEY1Q9Y5J3 304 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 RBM8AQ9Y5S9 174 aaKnown RBP9.66□□□□□ -0.86
MSH5-205ENST00000395853 CACNA1SQ13698 1873 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 FZD9O00144 591 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 HIP1O00291 1037 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 IKBKBO14920 756 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 DTNBO60941 627 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 KIF11P52732 1056 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 GOLGA8FQ08AF8 430 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 GOLGA8DPQ0D2H9 430 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 IRF5Q13568 498 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 KAZNQ674X7 775 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 SND1Q7KZF4 910 aaKnown RBP eCLIP9.66□□□□□ -0.86
MSH5-205ENST00000395853 CABP7Q86V35 215 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 ESX1Q8N693 406 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 AENQ8WTP8 325 aaKnown RBP9.66□□□□□ -0.86
MSH5-205ENST00000395853 IFT81Q8WYA0 676 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 CASP10Q92851 521 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 MAP4K1Q92918 833 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 SPATA17Q96L03 361 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 ZNF652Q9Y2D9 606 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 TSC22D4Q9Y3Q8 395 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 ZNF711Q9Y462 761 aa9.66□□□□□ -0.86
MSH5-205ENST00000395853 TTC34A8MYJ7 566 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 SPTLC1O15269 473 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 ASLP04424 464 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 ITGA2BP08514 1039 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 PYGMP11217 842 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 ACADSP16219 412 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 UBASH3AP57075 661 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 CTAG1AP78358 180 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 GLE1Q53GS7 698 aaKnown RBP9.65□□□□□ -0.86
MSH5-205ENST00000395853 SYDE2Q5VT97 1194 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 IRGCQ6NXR0 463 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 CAPN12Q6ZSI9 719 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 VSTM4Q8IW00 320 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 LRRC27Q9C0I9 530 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 ATP8A2Q9NTI2 1148 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 TAF6LQ9Y6J9 622 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 C5orf60A6NFR6 353 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 HIP1RO75146 1068 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 TGFB3P10600 412 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 ECE1P42892 770 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 MCCD1P59942 119 aaPredicted RBP9.65□□□□□ -0.86
MSH5-205ENST00000395853 ATP11AP98196 1134 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 MSLNQ13421 630 aaPredicted RBP9.65□□□□□ -0.86
MSH5-205ENST00000395853 CNPY1Q3B7I2 92 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 KIF6Q6ZMV9 814 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 GPC2Q8N158 579 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 MLKLQ8NB16 471 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 APPBP2Q92624 585 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 FBXW7Q969H0 707 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 LRRC45Q96CN5 670 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 MAELQ96JY0 434 aaKnown RBP9.65□□□□□ -0.86
MSH5-205ENST00000395853 TIPINQ9BVW5 301 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 NDEL1Q9GZM8 345 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 POLD4Q9HCU8 107 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 SNRKQ9NRH2 765 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 FANCLQ9NW38 375 aa9.65□□□□□ -0.86
MSH5-205ENST00000395853 HSFX1Q9UBD0 423 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms