RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 EPHA7Q15375 998 aa22.39■■□□□ 1.17
SNCA-203ENST00000394986 TRIM71Q2Q1W2 868 aaKnown RBP22.39■■□□□ 1.17
SNCA-203ENST00000394986 MFSD5Q6N075 450 aa22.39■■□□□ 1.17
SNCA-203ENST00000394986 DYDC2Q96IM9 177 aa22.39■■□□□ 1.17
SNCA-203ENST00000394986 RGL1Q9NZL6 768 aa22.39■■□□□ 1.17
SNCA-203ENST00000394986 WRAP73Q9P2S5 460 aaPredicted RBP22.39■■□□□ 1.17
SNCA-203ENST00000394986 TMEM150BA6NC51 233 aa22.38■■□□□ 1.17
SNCA-203ENST00000394986 ZBTB42B2RXF5 422 aa22.38■■□□□ 1.17
SNCA-203ENST00000394986 CSF2RAP15509 400 aa22.38■■□□□ 1.17
SNCA-203ENST00000394986 TECP42680 631 aa22.38■■□□□ 1.17
SNCA-203ENST00000394986 EPHB4P54760 987 aa22.38■■□□□ 1.17
SNCA-203ENST00000394986 BBXQ8WY36 941 aaPredicted RBP22.38■■□□□ 1.17
SNCA-203ENST00000394986 MBLAC1A4D2B0 266 aaPredicted RBP22.37■■□□□ 1.17
SNCA-203ENST00000394986 RRN3P2A6NIE6 340 aa22.37■■□□□ 1.17
SNCA-203ENST00000394986 BFSP2Q13515 415 aa22.37■■□□□ 1.17
SNCA-203ENST00000394986 PKP1Q13835 747 aa22.37■■□□□ 1.17
SNCA-203ENST00000394986 CTTNQ14247 550 aaKnown RBP22.37■■□□□ 1.17
SNCA-203ENST00000394986 CAGE1Q8TC20 777 aa22.37■■□□□ 1.17
SNCA-203ENST00000394986 EIF2AK1Q9BQI3 630 aaKnown RBP22.37■■□□□ 1.17
SNCA-203ENST00000394986 LXNQ9BS40 222 aa22.37■■□□□ 1.17
SNCA-203ENST00000394986 FTOQ9C0B1 505 aaKnown RBP eCLIP22.37■■□□□ 1.17
SNCA-203ENST00000394986 COLQQ9Y215 455 aaPredicted RBP22.37■■□□□ 1.17
SNCA-203ENST00000394986 PITPNM1O00562 1244 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 STBD1O95210 358 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 P4HBP07237 508 aaKnown RBP22.36■■□□□ 1.17
SNCA-203ENST00000394986 CKBP12277 381 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 THPOP40225 353 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 QARSP47897 775 aaKnown RBP22.36■■□□□ 1.17
SNCA-203ENST00000394986 PSMC5P62195 406 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 FPGSQ05932 587 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 CCDC155Q8N6L0 562 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 RETREG2Q8NC44 543 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 FAM167AQ96KS9 214 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 SH2D3AQ9BRG2 576 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 UBE2OQ9C0C9 1292 aaKnown RBP22.36■■□□□ 1.17
SNCA-203ENST00000394986 PRO3102Q9H379 93 aa22.36■■□□□ 1.17
SNCA-203ENST00000394986 CTSHP09668 335 aa22.35■■□□□ 1.17
SNCA-203ENST00000394986 ACRP10323 421 aa22.35■■□□□ 1.17
SNCA-203ENST00000394986 RBL2Q08999 1139 aa22.35■■□□□ 1.17
SNCA-203ENST00000394986 BECN1Q14457 450 aa22.35■■□□□ 1.17
SNCA-203ENST00000394986 IL17AQ16552 155 aa22.35■■□□□ 1.17
SNCA-203ENST00000394986 ZNF618Q5T7W0 954 aa22.35■■□□□ 1.17
SNCA-203ENST00000394986 MTHFD1LQ6UB35 978 aa22.35■■□□□ 1.17
SNCA-203ENST00000394986 TMEM199Q8N511 208 aa22.35■■□□□ 1.17
SNCA-203ENST00000394986 TNPO1Q92973 898 aaKnown RBP22.35■■□□□ 1.17
SNCA-203ENST00000394986 FAM49AQ9H0Q0 323 aaPredicted RBP22.35■■□□□ 1.17
SNCA-203ENST00000394986 SEPT9Q9UHD8 586 aaPredicted RBP22.35■■□□□ 1.17
SNCA-203ENST00000394986 COL1A2P08123 1366 aa22.34■■□□□ 1.17
SNCA-203ENST00000394986 IQCF3P0C7M6 154 aa22.34■■□□□ 1.17
SNCA-203ENST00000394986 KLRC1P26715 233 aa22.34■■□□□ 1.17
SNCA-203ENST00000394986 ATP2C1P98194 919 aaPredicted RBP22.34■■□□□ 1.17
SNCA-203ENST00000394986 ZNF484Q5JVG2 852 aa22.34■■□□□ 1.17
SNCA-203ENST00000394986 PLA2G4FQ68DD2 849 aa22.34■■□□□ 1.17
SNCA-203ENST00000394986 TRAF7Q6Q0C0 670 aa22.34■■□□□ 1.17
SNCA-203ENST00000394986 LRRC8DQ7L1W4 858 aa22.34■■□□□ 1.17
SNCA-203ENST00000394986 DNAJB3Q8WWF6 145 aa22.34■■□□□ 1.17
SNCA-203ENST00000394986 NRBP2Q9NSY0 501 aa22.34■■□□□ 1.17
SNCA-203ENST00000394986 RANBP2P49792 3224 aaKnown RBP22.33■■□□□ 1.17
SNCA-203ENST00000394986 DDX11L8A8MPP1 907 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 SLITRK3O94933 977 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 C22orf31O95567 290 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 SELPP16109 830 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 FXR2P51116 673 aaKnown RBP eCLIP22.33■■□□□ 1.17
SNCA-203ENST00000394986 SF3A1Q15459 793 aaKnown RBP22.33■■□□□ 1.17
SNCA-203ENST00000394986 TMEM266Q2M3C6 531 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 MTERF2Q49AM1 385 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 XKR3Q5GH77 459 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 DEFB128Q7Z7B8 93 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 TPH2Q8IWU9 490 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 VWCEQ96DN2 955 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 HSD17B14Q9BPX1 270 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 CLIC4Q9Y696 253 aa22.33■■□□□ 1.17
SNCA-203ENST00000394986 TRIP12Q14669 1992 aaPredicted RBP22.33■■□□□ 1.17
SNCA-203ENST00000394986 LAD1O00515 517 aa22.32■■□□□ 1.16
SNCA-203ENST00000394986 ZBTB39O15060 712 aa22.32■■□□□ 1.16
SNCA-203ENST00000394986 C9orf50Q5SZB4 431 aa22.32■■□□□ 1.16
SNCA-203ENST00000394986 TAF2Q6P1X5 1199 aa22.32■■□□□ 1.16
SNCA-203ENST00000394986 ANO5Q75V66 913 aa22.32■■□□□ 1.16
SNCA-203ENST00000394986 C16orf59Q7L2K0 433 aa22.32■■□□□ 1.16
SNCA-203ENST00000394986 PCDHA2Q9Y5H9 948 aa22.32■■□□□ 1.16
SNCA-203ENST00000394986 A0A087WWV3 80 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 PP2D1A8MPX8 630 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 MED24O75448 989 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 ZSCAN22P10073 491 aaPredicted RBP22.31■■□□□ 1.16
SNCA-203ENST00000394986 BMP8BP34820 402 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 PRPHP41219 470 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 NPEPPSP55786 919 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 CEBPZQ03701 1054 aaKnown RBP22.31■■□□□ 1.16
SNCA-203ENST00000394986 PPIGQ13427 754 aaKnown RBP eCLIP22.31■■□□□ 1.16
SNCA-203ENST00000394986 MBTPS1Q14703 1052 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 GPNMBQ14956 572 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 ZNF579Q8NAF0 562 aaKnown RBP22.31■■□□□ 1.16
SNCA-203ENST00000394986 ZSCAN16Q9H4T2 348 aaPredicted RBP22.31■■□□□ 1.16
SNCA-203ENST00000394986 ZSWIM4Q9H7M6 989 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 LRWD1Q9UFC0 647 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 SPATA31C1P0DKV0 1188 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 TMEM62Q0P6H9 643 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 TARBP2Q15633 366 aaKnown RBP22.31■■□□□ 1.16
SNCA-203ENST00000394986 DTHD1Q6ZMT9 781 aa22.31■■□□□ 1.16
SNCA-203ENST00000394986 C4orf19Q8IY42 314 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms