RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 MARK3P27448 753 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 ZNF200P98182 395 aaPredicted RBP9.67□□□□□ -0.86
APLF-202ENST00000394342 NR5A1Q13285 461 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 PLCB4Q15147 1175 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 SAFBQ15424 915 aaKnown RBP eCLIP9.67□□□□□ -0.86
APLF-202ENST00000394342 GRIK4Q16099 956 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 LETM2Q2VYF4 491 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 RASIP1Q5U651 963 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 LRCH2Q5VUJ6 765 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 PPP4R3AQ6IN85 833 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 PIK3AP1Q6ZUJ8 805 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 ZNF365Q70YC5 407 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 LRRC8DQ7L1W4 858 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 DIS3L2Q8IYB7 885 aaKnown RBP9.67□□□□□ -0.86
APLF-202ENST00000394342 FAM184AQ8NB25 1140 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 RDM1Q8NG50 284 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 ETNPPLQ8TBG4 499 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 HERVK_113Q902F9 699 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 C8orf76Q96K31 380 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 UIMC1Q96RL1 719 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 ZNF302Q9NR11 478 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 SETD4Q9NVD3 440 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 DDX25Q9UHL0 483 aaKnown RBP9.67□□□□□ -0.86
APLF-202ENST00000394342 PCDHA10Q9Y5I2 948 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 COL1A2P08123 1366 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 KIAA1671Q9BY89 1806 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 POTEB3A0JP26 581 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 MBLAC1A4D2B0 266 aaPredicted RBP9.66□□□□□ -0.86
APLF-202ENST00000394342 BTBD18B2RXH4 712 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 TBX3O15119 743 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 HBP1O60381 514 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 CCNT1O60563 726 aaKnown RBP9.66□□□□□ -0.86
APLF-202ENST00000394342 PSMD10O75832 226 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 CXCL10P02778 98 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 ACTN1P12814 892 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 SFNP31947 248 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 JAK3P52333 1124 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 FOSBP53539 338 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 SMAD3P84022 425 aaKnown RBP9.66□□□□□ -0.86
APLF-202ENST00000394342 TAF2Q6P1X5 1199 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 PDXDC2PQ6P474 469 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 POTEBQ6S5H4 581 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 RPAINQ86UA6 219 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 CCDC60Q8IWA6 550 aaPredicted RBP9.66□□□□□ -0.86
APLF-202ENST00000394342 FBXO18Q8NFZ0 1043 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 ATP8B4Q8TF62 1192 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 WNT8BQ93098 351 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 VWCEQ96DN2 955 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 TMX3Q96JJ7 454 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 FAM20AQ96MK3 541 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 KCNMB3Q9NPA1 279 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 DISC1Q9NRI5 854 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 TRPC6Q9Y210 931 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 KIF3AQ9Y496 699 aa9.66□□□□□ -0.86
APLF-202ENST00000394342 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
APLF-202ENST00000394342 IGSF9BQ9UPX0 1349 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 SLC37A4O43826 429 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 CD2BP2O95400 341 aaKnown RBP9.65□□□□□ -0.86
APLF-202ENST00000394342 INSRRP14616 1297 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 THPOP40225 353 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 EARS2Q5JPH6 523 aaKnown RBP9.65□□□□□ -0.86
APLF-202ENST00000394342 ZNF484Q5JVG2 852 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 FAM26DQ5JW98 314 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 ZNF618Q5T7W0 954 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 SWSAP1Q6NVH7 229 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 TRAF7Q6Q0C0 670 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 B3GNT9Q6UX72 402 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 DEFB128Q7Z7B8 93 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 LRCH3Q96II8 777 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 FAM167AQ96KS9 214 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 DCBLD2Q96PD2 775 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 FTOQ9C0B1 505 aaKnown RBP eCLIP9.65□□□□□ -0.86
APLF-202ENST00000394342 FOXP1Q9H334 677 aaPredicted RBP9.65□□□□□ -0.86
APLF-202ENST00000394342 UNC45AQ9H3U1 944 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 TUBE1Q9UJT0 475 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 SAMM50Q9Y512 469 aa9.65□□□□□ -0.86
APLF-202ENST00000394342 TRIP11Q15643 1979 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 ATG2AQ2TAZ0 1938 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 BRWD1Q9NSI6 2320 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.64□□□□□ -0.87
APLF-202ENST00000394342 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.64□□□□□ -0.87
APLF-202ENST00000394342 FAM205CA6NFA0 338 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 RSPH10B2B2RC85 870 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 CHMP2AO43633 222 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 NBNO60934 754 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 BAIAP3O94812 1187 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 BAG4O95429 457 aaKnown RBP9.64□□□□□ -0.87
APLF-202ENST00000394342 RSPH10BP0C881 870 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 ATP4AP20648 1035 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 IGBP1P78318 339 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 GUCY1B3Q02153 619 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 PPP2R5CQ13362 524 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 GPNMBQ14956 572 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 MARCH8Q5T0T0 291 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 FAM109BQ6ICB4 259 aaPredicted RBP9.64□□□□□ -0.87
APLF-202ENST00000394342 CNKSR3Q6P9H4 555 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 RUFY4Q6ZNE9 571 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 OTOP2Q7RTS6 562 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 MIER3Q7Z3K6 550 aa9.64□□□□□ -0.87
APLF-202ENST00000394342 RSPH3Q86UC2 560 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms