RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 MYLIPQ8WY64 445 aa34.76■■■■□ 3.16
CMTM4-202ENST00000394106 OSBPL7Q9BZF2 842 aa34.76■■■■□ 3.16
CMTM4-202ENST00000394106 SLC28A3Q9HAS3 691 aa34.76■■■■□ 3.16
CMTM4-202ENST00000394106 BRMS1Q9HCU9 246 aa34.76■■■■□ 3.16
CMTM4-202ENST00000394106 GABBR1Q9UBS5 961 aa34.76■■■■□ 3.16
CMTM4-202ENST00000394106 MYH9P35579 1960 aaKnown RBP34.75■■■■□ 3.15
CMTM4-202ENST00000394106 HBP1O60381 514 aa34.75■■■■□ 3.15
CMTM4-202ENST00000394106 KRT2P35908 639 aa34.75■■■■□ 3.15
CMTM4-202ENST00000394106 TRMT1LQ7Z2T5 733 aaKnown RBP34.75■■■■□ 3.15
CMTM4-202ENST00000394106 NEK8Q86SG6 692 aa34.75■■■■□ 3.15
CMTM4-202ENST00000394106 RPAINQ86UA6 219 aa34.75■■■■□ 3.15
CMTM4-202ENST00000394106 HERC6Q8IVU3 1022 aa34.75■■■■□ 3.15
CMTM4-202ENST00000394106 MBOAT7Q96N66 472 aa34.75■■■■□ 3.15
CMTM4-202ENST00000394106 PTPRSQ13332 1948 aa34.75■■■■□ 3.15
CMTM4-202ENST00000394106 CHRNA1P02708 482 aa34.74■■■■□ 3.15
CMTM4-202ENST00000394106 DEFB103AP81534 67 aa34.74■■■■□ 3.15
CMTM4-202ENST00000394106 TRIM29Q14134 588 aa34.74■■■■□ 3.15
CMTM4-202ENST00000394106 PLEKHG4Q58EX7 1191 aa34.74■■■■□ 3.15
CMTM4-202ENST00000394106 SEPT8Q92599 483 aa34.74■■■■□ 3.15
CMTM4-202ENST00000394106 UNC45AQ9H3U1 944 aa34.74■■■■□ 3.15
CMTM4-202ENST00000394106 UPF2Q9HAU5 1272 aaKnown RBP34.74■■■■□ 3.15
CMTM4-202ENST00000394106 DISC1Q9NRI5 854 aa34.74■■■■□ 3.15
CMTM4-202ENST00000394106 MAFBQ9Y5Q3 323 aaPredicted RBP34.74■■■■□ 3.15
CMTM4-202ENST00000394106 EFCAB14O75071 495 aa34.73■■■■□ 3.15
CMTM4-202ENST00000394106 ATP4AP20648 1035 aa34.73■■■■□ 3.15
CMTM4-202ENST00000394106 NR5A1Q13285 461 aa34.73■■■■□ 3.15
CMTM4-202ENST00000394106 TMCO2Q7Z6W1 182 aaPredicted RBP34.73■■■■□ 3.15
CMTM4-202ENST00000394106 ZSCAN31Q96LW9 406 aaPredicted RBP34.73■■■■□ 3.15
CMTM4-202ENST00000394106 PCDHA2Q9Y5H9 948 aa34.73■■■■□ 3.15
CMTM4-202ENST00000394106 SLC37A4O43826 429 aa34.72■■■■□ 3.15
CMTM4-202ENST00000394106 EARS2Q5JPH6 523 aaKnown RBP34.72■■■■□ 3.15
CMTM4-202ENST00000394106 PPP2R2DQ66LE6 453 aa34.72■■■■□ 3.15
CMTM4-202ENST00000394106 MTHFD1LQ6UB35 978 aa34.72■■■■□ 3.15
CMTM4-202ENST00000394106 SIP14410 1827 aa34.71■■■■□ 3.15
CMTM4-202ENST00000394106 FAM205CA6NFA0 338 aa34.71■■■■□ 3.15
CMTM4-202ENST00000394106 KIF28PB7ZC32 967 aa34.71■■■■□ 3.15
CMTM4-202ENST00000394106 PSMD10O75832 226 aa34.71■■■■□ 3.15
CMTM4-202ENST00000394106 JAK3P52333 1124 aa34.71■■■■□ 3.15
CMTM4-202ENST00000394106 MGAT3Q09327 533 aa34.71■■■■□ 3.15
CMTM4-202ENST00000394106 ETNPPLQ8TBG4 499 aa34.71■■■■□ 3.15
CMTM4-202ENST00000394106 CDY2AQ9Y6F7 541 aa34.71■■■■□ 3.15
CMTM4-202ENST00000394106 WDR81Q562E7 1941 aa34.71■■■■□ 3.15
CMTM4-202ENST00000394106 CCNT1O60563 726 aaKnown RBP34.7■■■■□ 3.15
CMTM4-202ENST00000394106 MMP1P03956 469 aa34.7■■■■□ 3.15
CMTM4-202ENST00000394106 CA3P07451 260 aa34.7■■■■□ 3.15
CMTM4-202ENST00000394106 GHRP10912 638 aa34.7■■■■□ 3.15
CMTM4-202ENST00000394106 KLRC1P26715 233 aa34.7■■■■□ 3.15
CMTM4-202ENST00000394106 SFNP31947 248 aa34.7■■■■□ 3.15
CMTM4-202ENST00000394106 MRPS6P82932 125 aaKnown RBP34.7■■■■□ 3.15
CMTM4-202ENST00000394106 ZNF484Q5JVG2 852 aa34.7■■■■□ 3.15
CMTM4-202ENST00000394106 KRT40Q6A162 431 aa34.7■■■■□ 3.15
CMTM4-202ENST00000394106 BBXQ8WY36 941 aaPredicted RBP34.7■■■■□ 3.15
CMTM4-202ENST00000394106 ZBED2Q9BTP6 218 aa34.7■■■■□ 3.15
CMTM4-202ENST00000394106 IGSF9BQ9UPX0 1349 aa34.7■■■■□ 3.15
CMTM4-202ENST00000394106 COL1A2P08123 1366 aa34.7■■■■□ 3.15
CMTM4-202ENST00000394106 TLL1O43897 1013 aa34.69■■■■□ 3.14
CMTM4-202ENST00000394106 RPLP2P05387 115 aaKnown RBP34.69■■■■□ 3.14
CMTM4-202ENST00000394106 FOSL2P15408 326 aa34.69■■■■□ 3.14
CMTM4-202ENST00000394106 GCFC2P16383 781 aaKnown RBP34.69■■■■□ 3.14
CMTM4-202ENST00000394106 TMEM62Q0P6H9 643 aa34.69■■■■□ 3.14
CMTM4-202ENST00000394106 RABEP1Q15276 862 aa34.69■■■■□ 3.14
CMTM4-202ENST00000394106 LIN28BQ6ZN17 250 aaKnown RBP eCLIP34.69■■■■□ 3.14
CMTM4-202ENST00000394106 MIER3Q7Z3K6 550 aa34.69■■■■□ 3.14
CMTM4-202ENST00000394106 IFIH1Q9BYX4 1025 aaKnown RBP34.69■■■■□ 3.14
CMTM4-202ENST00000394106 SH2B1Q9NRF2 756 aaPredicted RBP34.69■■■■□ 3.14
CMTM4-202ENST00000394106 MICAL3Q7RTP6 2002 aa34.69■■■■□ 3.14
CMTM4-202ENST00000394106 IER5Q5VY09 327 aa34.68■■■■□ 3.14
CMTM4-202ENST00000394106 PPP4R3AQ6IN85 833 aa34.68■■■■□ 3.14
CMTM4-202ENST00000394106 DIS3L2Q8IYB7 885 aaKnown RBP34.68■■■■□ 3.14
CMTM4-202ENST00000394106 TNFRSF25Q93038 417 aa34.68■■■■□ 3.14
CMTM4-202ENST00000394106 NAP1L4Q99733 375 aaKnown RBP34.68■■■■□ 3.14
CMTM4-202ENST00000394106 LLPHQ9BRT6 129 aaKnown RBP34.68■■■■□ 3.14
CMTM4-202ENST00000394106 PRDM12Q9H4Q4 367 aa34.68■■■■□ 3.14
CMTM4-202ENST00000394106 SMIM35A0A1B0GVV1 85 aa34.67■■■■□ 3.14
CMTM4-202ENST00000394106 ZBTB42B2RXF5 422 aa34.67■■■■□ 3.14
CMTM4-202ENST00000394106 BTBD18B2RXH4 712 aa34.67■■■■□ 3.14
CMTM4-202ENST00000394106 M0QZ92 97 aa34.67■■■■□ 3.14
CMTM4-202ENST00000394106 LPIN1Q14693 890 aa34.67■■■■□ 3.14
CMTM4-202ENST00000394106 FAM117BQ6P1L5 589 aa34.67■■■■□ 3.14
CMTM4-202ENST00000394106 FAM167AQ96KS9 214 aa34.67■■■■□ 3.14
CMTM4-202ENST00000394106 AMHP03971 560 aa34.66■■■■□ 3.14
CMTM4-202ENST00000394106 GUCY1B3Q02153 619 aa34.66■■■■□ 3.14
CMTM4-202ENST00000394106 UGCGQ16739 394 aa34.66■■■■□ 3.14
CMTM4-202ENST00000394106 APBB2Q92870 758 aa34.66■■■■□ 3.14
CMTM4-202ENST00000394106 TRPV2Q9Y5S1 764 aa34.66■■■■□ 3.14
CMTM4-202ENST00000394106 ZNF862O60290 1169 aa34.65■■■■□ 3.14
CMTM4-202ENST00000394106 PRKCEQ02156 737 aa34.65■■■■□ 3.14
CMTM4-202ENST00000394106 FBXO47Q5MNV8 452 aa34.65■■■■□ 3.14
CMTM4-202ENST00000394106 MYOCDQ8IZQ8 938 aa34.65■■■■□ 3.14
CMTM4-202ENST00000394106 RDM1Q8NG50 284 aa34.65■■■■□ 3.14
CMTM4-202ENST00000394106 MARCH6O60337 910 aa34.64■■■■□ 3.14
CMTM4-202ENST00000394106 OATP04181 439 aa34.64■■■■□ 3.14
CMTM4-202ENST00000394106 MKRN4PQ13434 485 aaPredicted RBP34.64■■■■□ 3.14
CMTM4-202ENST00000394106 FAM20AQ96MK3 541 aa34.64■■■■□ 3.14
CMTM4-202ENST00000394106 KCNMB3Q9NPA1 279 aa34.64■■■■□ 3.14
CMTM4-202ENST00000394106 NRBP2Q9NSY0 501 aa34.64■■■■□ 3.14
CMTM4-202ENST00000394106 CEP131Q9UPN4 1083 aa34.64■■■■□ 3.14
CMTM4-202ENST00000394106 ST18O60284 1047 aa34.63■■■■□ 3.13
CMTM4-202ENST00000394106 GJB5O95377 273 aa34.63■■■■□ 3.13
CMTM4-202ENST00000394106 C22orf31O95567 290 aa34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms