RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 YWHABP31946 246 aaKnown RBP9.57□□□□□ -0.88
TDP1-203ENST00000393454 SP2Q02086 613 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 ARID5BQ14865 1188 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 NR1I3Q14994 352 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 UTP14CQ5TAP6 766 aaKnown RBP9.57□□□□□ -0.88
TDP1-203ENST00000393454 SWSAP1Q6NVH7 229 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 PADI6Q6TGC4 694 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 MAEAQ7L5Y9 396 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 FAM114A1Q8IWE2 563 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 PARK7Q99497 189 aaKnown RBP9.57□□□□□ -0.88
TDP1-203ENST00000393454 SENP7Q9BQF6 1050 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 KCNF1Q9H3M0 494 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 INTS13Q9NVM9 706 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.57□□□□□ -0.88
TDP1-203ENST00000393454 LIMA1Q9UHB6 759 aaKnown RBP9.57□□□□□ -0.88
TDP1-203ENST00000393454 PCDHA2Q9Y5H9 948 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 BACH1O14867 736 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 TEX33O43247 280 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 GCNT3O95395 438 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 FGFR1OPO95684 399 aaKnown RBP9.57□□□□□ -0.88
TDP1-203ENST00000393454 TPM2P07951 284 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 EDNRBP24530 442 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 EEF1GP26641 437 aaKnown RBP9.57□□□□□ -0.88
TDP1-203ENST00000393454 ICAM3P32942 547 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 COPB1P53618 953 aaKnown RBP9.57□□□□□ -0.88
TDP1-203ENST00000393454 GSDMDP57764 484 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 ACTR2P61160 394 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 LRRC63Q05C16 580 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 LRMPQ12912 555 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 XKR9Q5GH70 373 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 MIS18BP1Q6P0N0 1132 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 IRF2BP1Q8IU81 584 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 C4orf19Q8IY42 314 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 PTPN18Q99952 460 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 SH2D3AQ9BRG2 576 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 PARVGQ9HBI0 331 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 KCND2Q9NZV8 630 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 DBR1Q9UK59 544 aaKnown RBP9.57□□□□□ -0.88
TDP1-203ENST00000393454 IVNS1ABPQ9Y6Y0 642 aa9.57□□□□□ -0.88
TDP1-203ENST00000393454 DNAJC25-GNG10A0A024R161 153 aa9.56□□□□□ -0.88
TDP1-203ENST00000393454 TMEM150BA6NC51 233 aa9.56□□□□□ -0.88
TDP1-203ENST00000393454 USO1O60763 962 aaKnown RBP9.56□□□□□ -0.88
TDP1-203ENST00000393454 DKC1O60832 514 aaKnown RBP eCLIP9.56□□□□□ -0.88
TDP1-203ENST00000393454 LYPLA2O95372 231 aa9.56□□□□□ -0.88
TDP1-203ENST00000393454 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
TDP1-203ENST00000393454 MTIF2P46199 727 aaKnown RBP9.56□□□□□ -0.88
TDP1-203ENST00000393454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.56□□□□□ -0.88
TDP1-203ENST00000393454 OTUD6AQ7L8S5 288 aa9.56□□□□□ -0.88
TDP1-203ENST00000393454 APTXQ7Z2E3 356 aaKnown RBP9.56□□□□□ -0.88
TDP1-203ENST00000393454 CACTINQ8WUQ7 758 aaKnown RBP9.56□□□□□ -0.88
TDP1-203ENST00000393454 SCFD1Q8WVM8 642 aa9.56□□□□□ -0.88
TDP1-203ENST00000393454 ATP6V0A1Q93050 837 aa9.56□□□□□ -0.88
TDP1-203ENST00000393454 CNOT6LQ96LI5 555 aaKnown RBP9.56□□□□□ -0.88
TDP1-203ENST00000393454 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
TDP1-203ENST00000393454 RRAGDQ9NQL2 400 aaPredicted RBP9.56□□□□□ -0.88
TDP1-203ENST00000393454 TELO2Q9Y4R8 837 aa9.56□□□□□ -0.88
TDP1-203ENST00000393454 MYH11P35749 1972 aa9.56□□□□□ -0.88
TDP1-203ENST00000393454 HIP1RO75146 1068 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 ECM2O94769 699 aaPredicted RBP9.55□□□□□ -0.88
TDP1-203ENST00000393454 PRPF6O94906 941 aaKnown RBP9.55□□□□□ -0.88
TDP1-203ENST00000393454 MYBP10242 640 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 UBA1P22314 1058 aaKnown RBP9.55□□□□□ -0.88
TDP1-203ENST00000393454 RARRES1P49788 294 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 CASP5P51878 434 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 UBXN1Q04323 297 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 NEDD9Q14511 834 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 PLA2G4FQ68DD2 849 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 SPECC1LQ69YQ0 1117 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 ABHD15Q6UXT9 468 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 RASAL3Q86YV0 1011 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 LRRC8AQ8IWT6 810 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 FGD4Q96M96 766 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 MORF4L1Q9UBU8 362 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 ODF2LQ9ULJ1 636 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 WDR81Q562E7 1941 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 ASB14A6NK59 587 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 SUPT20HL2P0C7V6 817 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 SFPQP23246 707 aaKnown RBP eCLIP9.55□□□□□ -0.88
TDP1-203ENST00000393454 GUCY2CP25092 1073 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 ADORA2AP29274 412 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 NMT1P30419 496 aaKnown RBP9.55□□□□□ -0.88
TDP1-203ENST00000393454 NPEPPSP55786 919 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 LY6KQ17RY6 165 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 ODR4Q5SWX8 454 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 RGMBQ6NW40 437 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 FAM178BQ8IXR5 827 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 CCDC150Q8NCX0 1101 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 MLXIPQ9HAP2 919 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 GPBP1L1Q9HC44 474 aaPredicted RBP9.55□□□□□ -0.88
TDP1-203ENST00000393454 ANKEF1Q9NU02 776 aa9.55□□□□□ -0.88
TDP1-203ENST00000393454 SEPT9Q9UHD8 586 aaPredicted RBP9.55□□□□□ -0.88
TDP1-203ENST00000393454 MCM3APO60318 1980 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 MYH9P35579 1960 aaKnown RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 PLXNB2O15031 1838 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 MANSC4A6NHS7 340 aaPredicted RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 LRRC10BA6NIK2 292 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 STRNO43815 780 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 GGPS1O95749 300 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 TGFB3P10600 412 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 FKBP3Q00688 224 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms