RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 TMCO2Q7Z6W1 182 aaPredicted RBP9.25□□□□□ -0.93
CASP4-201ENST00000393150 SESTD1Q86VW0 696 aa9.25□□□□□ -0.93
CASP4-201ENST00000393150 TMEM57Q8N5G2 664 aa9.25□□□□□ -0.93
CASP4-201ENST00000393150 PRSS33Q8NF86 280 aa9.25□□□□□ -0.93
CASP4-201ENST00000393150 DNERQ8NFT8 737 aa9.25□□□□□ -0.93
CASP4-201ENST00000393150 RHPN1Q8TCX5 695 aa9.25□□□□□ -0.93
CASP4-201ENST00000393150 SEPT8Q92599 483 aa9.25□□□□□ -0.93
CASP4-201ENST00000393150 ZSCAN10Q96SZ4 725 aaPredicted RBP9.25□□□□□ -0.93
CASP4-201ENST00000393150 STX8Q9UNK0 236 aa9.25□□□□□ -0.93
CASP4-201ENST00000393150 EXOC6BQ9Y2D4 811 aa9.25□□□□□ -0.93
CASP4-201ENST00000393150 MYO5AQ9Y4I1 1855 aaKnown RBP9.25□□□□□ -0.93
CASP4-201ENST00000393150 EML1O00423 815 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 RAB11FIP3O75154 756 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 UPP2O95045 317 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 GH1P01241 217 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 CLUL1Q15846 466 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 PKDCCQ504Y2 493 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 C6orf118Q5T5N4 469 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 SPRED2Q7Z698 418 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 FBXO11Q86XK2 927 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 TRMT2AQ8IZ69 625 aaKnown RBP9.24□□□□□ -0.93
CASP4-201ENST00000393150 FIBCD1Q8N539 461 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 IL17RAQ96F46 866 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 IGFLR1Q9H665 355 aa9.24□□□□□ -0.93
CASP4-201ENST00000393150 ZBED9Q6R2W3 1325 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 PARP14Q460N5 1801 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 RIF1Q5UIP0 2472 aaKnown RBP9.23□□□□□ -0.93
CASP4-201ENST00000393150 FSD2A1L4K1 749 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 TSPY2A6NKD2 308 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 RSPH10B2B2RC85 870 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 MBTPS2O43462 519 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 NBNO60934 754 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 RSPH10BP0C881 870 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 SRGAP2BP0DMP2 458 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 BMP2P12643 396 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 ATP5JP18859 108 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 CTNNB1P35222 781 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 ID4P47928 161 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 ZXDAP98168 799 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 TFAP4Q01664 338 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 SIGLEC14Q08ET2 396 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 MUM1L1Q5H9M0 696 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 MCTP2Q6DN12 878 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 GDF6Q6KF10 455 aaPredicted RBP9.23□□□□□ -0.93
CASP4-201ENST00000393150 KCTD1Q719H9 257 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 CHST3Q7LGC8 479 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 NEDD1Q8NHV4 660 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 RNF217Q8TC41 542 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 GPATCH3Q96I76 525 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 ALG1Q9BT22 464 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 GTF2IRD1Q9UHL9 959 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 PRR12Q9ULL5 1215 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 MTMR7Q9Y216 660 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 WDFY4Q6ZS81 3184 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 ZNF318Q5VUA4 2279 aa9.23□□□□□ -0.93
CASP4-201ENST00000393150 CACNA1HO95180 2353 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 SPTBN4Q9H254 2564 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 PRDM1O75626 825 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 ZFYP08048 801 aaPredicted RBP9.22□□□□□ -0.93
CASP4-201ENST00000393150 GNAT1P11488 350 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 PTGS1P23219 599 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 NOS2P35228 1153 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 THPOP40225 353 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 HTRA4P83105 476 aaPredicted RBP9.22□□□□□ -0.93
CASP4-201ENST00000393150 RBL2Q08999 1139 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 TCF15Q12870 199 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 RHBDD1Q8TEB9 315 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 DCAF4Q8WV16 495 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 AFG1LQ8WV93 481 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 APBB2Q92870 758 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 CHMP4CQ96CF2 233 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 HAUS7Q99871 368 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 IFIH1Q9BYX4 1025 aaKnown RBP9.22□□□□□ -0.93
CASP4-201ENST00000393150 CHMP4BQ9H444 224 aaKnown RBP9.22□□□□□ -0.93
CASP4-201ENST00000393150 POLMQ9NP87 494 aaPredicted RBP9.22□□□□□ -0.93
CASP4-201ENST00000393150 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 FAM86C1Q9NVL1 165 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 SCN5AQ14524 2016 aa9.22□□□□□ -0.93
CASP4-201ENST00000393150 IGKV6D-41A0A0C4DH26 115 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 SPATA31C2B4DYI2 1134 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 AXIN1O15169 862 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 MMP3P08254 477 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 AVPR2P30518 371 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 LAMC2Q13753 1193 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 NAA30Q147X3 362 aaPredicted RBP9.21□□□□□ -0.94
CASP4-201ENST00000393150 ECM1Q16610 540 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 KIAA0753Q2KHM9 967 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 C4orf17Q53FE4 359 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 TMEM63BQ5T3F8 832 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 ZNF618Q5T7W0 954 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.21□□□□□ -0.94
CASP4-201ENST00000393150 SEPT14Q6ZU15 432 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 DBF4BQ8NFT6 615 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 PPP1R13LQ8WUF5 828 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 TOP1MTQ969P6 601 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 STRBPQ96SI9 672 aaKnown RBP9.21□□□□□ -0.94
CASP4-201ENST00000393150 SAP130Q9H0E3 1048 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 PUS7LQ9H0K6 701 aaKnown RBP9.21□□□□□ -0.94
CASP4-201ENST00000393150 HDAC6Q9UBN7 1215 aa9.21□□□□□ -0.94
CASP4-201ENST00000393150 DACH1Q9UI36 760 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms