RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 PARVGQ9HBI0 331 aa20.06■□□□□ 0.8
ACTN4-202ENST00000390009 SPON1Q9HCB6 807 aa20.06■□□□□ 0.8
ACTN4-202ENST00000390009 TYW1Q9NV66 732 aaKnown RBP20.06■□□□□ 0.8
ACTN4-202ENST00000390009 TMOD4Q9NZQ9 345 aa20.06■□□□□ 0.8
ACTN4-202ENST00000390009 ZNF214Q9UL59 606 aaPredicted RBP20.06■□□□□ 0.8
ACTN4-202ENST00000390009 REXO2Q9Y3B8 237 aaKnown RBP20.06■□□□□ 0.8
ACTN4-202ENST00000390009 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.06■□□□□ 0.8
ACTN4-202ENST00000390009 DDNO94850 711 aaPredicted RBP20.06■□□□□ 0.8
ACTN4-202ENST00000390009 P4HBP07237 508 aaKnown RBP20.06■□□□□ 0.8
ACTN4-202ENST00000390009 BAATQ14032 418 aaPredicted RBP20.06■□□□□ 0.8
ACTN4-202ENST00000390009 CATSPERGQ6ZRH7 1159 aa20.06■□□□□ 0.8
ACTN4-202ENST00000390009 TBC1D22BQ9NU19 505 aa20.06■□□□□ 0.8
ACTN4-202ENST00000390009 AFG3L2Q9Y4W6 797 aa20.06■□□□□ 0.8
ACTN4-202ENST00000390009 KIAA1217Q5T5P2 1943 aa20.06■□□□□ 0.8
ACTN4-202ENST00000390009 PTPRFP10586 1907 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 ARHGAP25P42331 645 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 KCNMA1Q12791 1236 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 FAM184BQ9ULE4 1060 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 ODF2LQ9ULJ1 636 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 PLAGL2Q9UPG8 496 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 SAMM50Q9Y512 469 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 ASTN1O14525 1302 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 ARHGEF35A5YM69 484 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 EIF3DO15371 548 aaKnown RBP eCLIP20.05■□□□□ 0.8
ACTN4-202ENST00000390009 USP2O75604 605 aaPredicted RBP20.05■□□□□ 0.8
ACTN4-202ENST00000390009 ABL1P00519 1130 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 HNRNPH3P31942 346 aaKnown RBP20.05■□□□□ 0.8
ACTN4-202ENST00000390009 ZNF131P52739 623 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 CDK17Q00537 523 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 KCNA1Q09470 495 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 NEK11Q8NG66 645 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 FHDC1Q9C0D6 1143 aaPredicted RBP20.05■□□□□ 0.8
ACTN4-202ENST00000390009 ZSWIM4Q9H7M6 989 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 NHEJ1Q9H9Q4 299 aaPredicted RBP20.05■□□□□ 0.8
ACTN4-202ENST00000390009 SEL1LQ9UBV2 794 aa20.05■□□□□ 0.8
ACTN4-202ENST00000390009 NMT1P30419 496 aaKnown RBP20.04■□□□□ 0.8
ACTN4-202ENST00000390009 CYLC1P35663 651 aaPredicted RBP20.04■□□□□ 0.8
ACTN4-202ENST00000390009 TMEM132BQ14DG7 1078 aa20.04■□□□□ 0.8
ACTN4-202ENST00000390009 CCDC170Q8IYT3 715 aa20.04■□□□□ 0.8
ACTN4-202ENST00000390009 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.04■□□□□ 0.83e-6■■□□□ 13.1
ACTN4-202ENST00000390009 V9GYY5 206 aaPredicted RBP20.04■□□□□ 0.8
ACTN4-202ENST00000390009 GUCY2CP25092 1073 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 FRMD5Q7Z6J6 570 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 MTERF4Q7Z6M4 381 aaKnown RBP20.03■□□□□ 0.8
ACTN4-202ENST00000390009 FIZ1Q96SL8 496 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 WDR81Q562E7 1941 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 OTOFQ9HC10 1997 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 TESPA1A2RU30 521 aaPredicted RBP20.03■□□□□ 0.8
ACTN4-202ENST00000390009 ATP2A1O14983 1001 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 ATP9AO75110 1047 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 NR3C1P04150 777 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 MAP3K9P80192 1104 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 ZNF569Q5MCW4 686 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 LRRN4CLQ8ND94 238 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 BAP1Q92560 729 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 TEX13BQ9BXU2 312 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 EDEM3Q9BZQ6 932 aa20.03■□□□□ 0.8
ACTN4-202ENST00000390009 ADARB2Q9NS39 739 aaKnown RBP20.03■□□□□ 0.8
ACTN4-202ENST00000390009 ZMYM2Q9UBW7 1377 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 RPL13P26373 211 aaKnown RBP20.02■□□□□ 0.8
ACTN4-202ENST00000390009 QARSP47897 775 aaKnown RBP20.02■□□□□ 0.8
ACTN4-202ENST00000390009 HERVK_113P62684 666 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 KRT83P78385 493 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 ZC2HC1CQ53FD0 456 aaPredicted RBP20.02■□□□□ 0.8
ACTN4-202ENST00000390009 XRRA1Q6P2D8 792 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 PADI6Q6TGC4 694 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 DLK2Q6UY11 383 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.02■□□□□ 0.8
ACTN4-202ENST00000390009 RRAGAQ7L523 313 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 FAM178BQ8IXR5 827 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 MAP7D2Q96T17 732 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 ARMCX3Q9UH62 379 aaPredicted RBP20.02■□□□□ 0.8
ACTN4-202ENST00000390009 SNCAIPQ9Y6H5 919 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 PAPPA2Q9BXP8 1791 aa20.02■□□□□ 0.8
ACTN4-202ENST00000390009 LRRC53A6NM62 1247 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 EIF3CLB5ME19 914 aaKnown RBP20.02■□□□□ 0.79
ACTN4-202ENST00000390009 TGFB1I1O43294 461 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 CCND2P30279 289 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 KCNH2Q12809 1159 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 VGLL4Q14135 290 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 SH3D19Q5HYK7 790 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 ODR4Q5SWX8 454 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 ZNF720Q7Z2F6 126 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 CACNA2D4Q7Z3S7 1137 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 VSIG10LQ86VR7 867 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 EIF3CQ99613 913 aaKnown RBP20.02■□□□□ 0.79
ACTN4-202ENST00000390009 HOXC10Q9NYD6 342 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 MYO1AQ9UBC5 1043 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 MRFAP1Q9Y605 127 aa20.02■□□□□ 0.79
ACTN4-202ENST00000390009 UBE4BO95155 1302 aa20.01■□□□□ 0.79
ACTN4-202ENST00000390009 LOC285556D6RIA3 1793 aa20.01■□□□□ 0.79
ACTN4-202ENST00000390009 SPDYE16A6NNV3 312 aaPredicted RBP20.01■□□□□ 0.79
ACTN4-202ENST00000390009 CLIC2O15247 247 aa20.01■□□□□ 0.79
ACTN4-202ENST00000390009 HIP1RO75146 1068 aa20.01■□□□□ 0.79
ACTN4-202ENST00000390009 AKAP3O75969 853 aa20.01■□□□□ 0.79
ACTN4-202ENST00000390009 NR3C2P08235 984 aa20.01■□□□□ 0.79
ACTN4-202ENST00000390009 MAPK7Q13164 816 aa20.01■□□□□ 0.79
ACTN4-202ENST00000390009 HAUS4Q9H6D7 363 aa20.01■□□□□ 0.79
ACTN4-202ENST00000390009 RNF181Q9P0P0 153 aa20.01■□□□□ 0.79
ACTN4-202ENST00000390009 CEP72Q9P209 647 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms