RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 HIP1RO75146 1068 aa20.54■□□□□ 0.88
PPFIA1-202ENST00000389547 LSP1P33241 339 aa20.54■□□□□ 0.88
PPFIA1-202ENST00000389547 SHROOM1Q2M3G4 852 aaPredicted RBP20.54■□□□□ 0.88
PPFIA1-202ENST00000389547 EEPD1Q7L9B9 569 aa20.54■□□□□ 0.88
PPFIA1-202ENST00000389547 MIER3Q7Z3K6 550 aa20.54■□□□□ 0.88
PPFIA1-202ENST00000389547 CCDC25Q86WR0 208 aa20.54■□□□□ 0.88
PPFIA1-202ENST00000389547 TFR2Q9UP52 801 aa20.54■□□□□ 0.88
PPFIA1-202ENST00000389547 PTPAQ15257 358 aa20.54■□□□□ 0.88
PPFIA1-202ENST00000389547 MGARPQ8TDB4 240 aa20.54■□□□□ 0.88
PPFIA1-202ENST00000389547 GSTTP1A0A1W2PQM5 241 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 LRRD1A4D1F6 860 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 CYTH3O43739 400 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 CTNND1O60716 968 aaKnown RBP20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 RPS6KA5O75582 802 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 HMGCS2P54868 508 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 NLRX1Q86UT6 975 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 SLFN12Q8IYM2 578 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 RPUSD2Q8IZ73 545 aaKnown RBP20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 LRRC1Q9BTT6 524 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 ZNF577Q9BSK1 485 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 GAKO14976 1311 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 MOCS3O95396 460 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 CCDC13Q8IYE1 715 aa20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 NOVA2Q9UNW9 492 aaKnown RBP20.53■□□□□ 0.88
PPFIA1-202ENST00000389547 STAT3P40763 770 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 MTMR2Q13614 643 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 RRAGAQ7L523 313 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 AK8Q96MA6 479 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 PRR12Q9ULL5 1215 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 FZD1Q9UP38 647 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 ZNF579Q8NAF0 562 aaKnown RBP20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 UHMK1Q8TAS1 419 aaKnown RBP20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 MIEF2Q96C03 454 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 NUP58Q9BVL2 599 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 KIF9Q9HAQ2 790 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 TUBE1Q9UJT0 475 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 CD2APQ9Y5K6 639 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 KRT13P13646 458 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 CCDC38Q502W7 563 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 HVCN1Q96D96 273 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 ZBTB10Q96DT7 871 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 EPN3Q9H201 632 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 PANK4Q9NVE7 773 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 FAM198AQ9UFP1 575 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 HACL1Q9UJ83 578 aa20.52■□□□□ 0.88
PPFIA1-202ENST00000389547 USP54Q70EL1 1684 aa20.52■□□□□ 0.87
PPFIA1-202ENST00000389547 TGFB2P61812 414 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 FAM26FQ5R3K3 315 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 NAA35Q5VZE5 725 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 VPS36Q86VN1 386 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 AGBL3Q8NEM8 1001 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 A0A0U1RQJ8 604 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 ANKRD62A6NC57 917 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 CRYMQ14894 314 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 ARL8AQ96BM9 186 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 B4DLN1 442 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 WNT10BO00744 389 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 HARSP12081 509 aaKnown RBP20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 TAF11Q15544 211 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 FAM160B2Q86V87 743 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 MCF2L2Q86YR7 1114 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 PCDHB13Q9Y5F0 798 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 WDR93Q6P2C0 686 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 KRT26Q7Z3Y9 468 aa20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 NOP53Q9NZM5 478 aaKnown RBP20.51■□□□□ 0.87
PPFIA1-202ENST00000389547 GMNCA6NCL1 334 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 VSIG1Q86XK7 387 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 PIGOQ8TEQ8 1089 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 KAT2BQ92831 832 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 ZKSCAN4Q969J2 545 aaPredicted RBP20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 TSC22D3Q99576 134 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 ZMYND12Q9H0C1 365 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 NLRC4Q9NPP4 1024 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.5■□□□□ 0.871e-6■■■■■ 98.5
PPFIA1-202ENST00000389547 POLE2P56282 527 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 CTTNQ14247 550 aaKnown RBP20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 TRIM4Q9C037 500 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 PLAAQ9Y263 795 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 CETN3O15182 167 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 CYB5D1Q6P9G0 228 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 INTS8Q75QN2 995 aaKnown RBP20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 KLHL29Q96CT2 875 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 TRIM7Q9C029 511 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 DPH5Q9H2P9 285 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 KDM3AQ9Y4C1 1321 aa20.5■□□□□ 0.87
PPFIA1-202ENST00000389547 TARSL2A2RTX5 802 aaKnown RBP20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 SFI1A8K8P3 1242 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 GBP1P32455 592 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 TSNAXIP1Q2TAA8 658 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 LDHDQ86WU2 507 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 MYOCDQ8IZQ8 938 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 E9PMD0 336 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 DNM2P50570 870 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 EHHADHQ08426 723 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 NR1I3Q14994 352 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 HPS3Q969F9 1004 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 RNPC3Q96LT9 517 aaKnown RBP20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 HMGB1P1B2RPK0 211 aaPredicted RBP20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 RAPGEF1Q13905 1077 aa20.49■□□□□ 0.87
PPFIA1-202ENST00000389547 MAP3K14Q99558 947 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms