RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 TFAP4Q01664 338 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 HIC1Q14526 733 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 FAM89AQ96GI7 184 aa13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 FTOQ9C0B1 505 aaKnown RBP eCLIP13.31□□□□□ -0.28
SRGAP3-202ENST00000383836 CCDC127Q96BQ5 260 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 STAP2Q9UGK3 403 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 SPDYE16A6NNV3 312 aaPredicted RBP13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 LRRC63Q05C16 580 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 TET3O43151 1660 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 HIBADHP31937 336 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 HNRNPH1P31943 449 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 PGM1P36871 562 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 ATP6V0A1Q93050 837 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 GINM1Q9NU53 330 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 TCP11X1B4DZS4 312 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 CFBP00751 764 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 KLHL38Q2WGJ6 581 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 AGGF1Q8N302 714 aaeCLIP13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 DNAJC9Q8WXX5 260 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 DCAF5Q96JK2 942 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 KLC2Q9H0B6 622 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 KIF9Q9HAQ2 790 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 MLXIPLQ9NP71 852 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 FGAP02671 866 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 OATP04181 439 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 MAP3K10Q02779 954 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 MMS19Q96T76 1030 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 MED10Q9BTT4 135 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 ADA2Q9NZK5 511 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 HESX1Q9UBX0 185 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 SUN2Q9UH99 717 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 PDE6AP16499 860 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 EPHB1P54762 984 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 BTBD6Q96KE9 485 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 NDST4Q9H3R1 872 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 OSBPL3Q9H4L5 887 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 CFAP69A5D8W1 941 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 NGLY1Q96IV0 654 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 DISC1Q9NRI5 854 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 FAM8A1Q9UBU6 413 aa13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 SRPRBQ9Y5M8 271 aaKnown RBP13.3□□□□□ -0.28
SRGAP3-202ENST00000383836 GAP43P17677 238 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 TRAF7Q6Q0C0 670 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 NCLNQ969V3 563 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 ADAMTS12P58397 1594 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 THOC5Q13769 683 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 FAM47AQ5JRC9 791 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 RESP18Q5W5W9 173 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 IFNL3Q8IZI9 196 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 OR9Q1Q8NGQ5 310 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 DMRT2Q9Y5R5 561 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 KRT38O76015 456 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 ARL4CP56559 192 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 SPATA21Q7Z572 469 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 GPKOWQ92917 476 aaPredicted RBP eCLIP13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 ZBTB10Q96DT7 871 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 LPXNO60711 386 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 PCP11498 1178 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 BRAFP15056 766 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 ADCK1Q86TW2 530 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 NAF1Q96HR8 494 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 BICRAQ9NZM4 1560 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 PTPRKQ15262 1439 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 PDE8AO60658 829 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 TAC1P20366 129 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 RESTQ13127 1097 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 GCKRQ14397 625 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 CYTH1Q15438 398 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 RNF26Q9BY78 433 aaPredicted RBP13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 DNAJC17Q9NVM6 304 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 PKD2L2Q9NZM6 624 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 YTHDC2Q9H6S0 1430 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 CNTRLQ7Z7A1 2325 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 IFRD2Q12894 506 aaPredicted RBP13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 ARHGAP31Q2M1Z3 1444 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 TOM1O60784 492 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 MMP1P03956 469 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 S100A5P33763 92 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 BBS9Q3SYG4 887 aa13.29□□□□□ -0.28
SRGAP3-202ENST00000383836 SERPINB1P30740 379 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 PAGE5Q96GU1 130 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 TNKSO95271 1327 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 WBP4O75554 376 aaKnown RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 TAF1BQ53T94 588 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 LSP1P33241 339 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 PODNQ7Z5L7 613 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 NLRX1Q86UT6 975 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 SEC16BQ96JE7 1060 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 EYA3Q99504 573 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 MIF4GDA9UHW6 222 aaKnown RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 ADCY3O60266 1144 aa13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 KPNB1Q14974 876 aaKnown RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 EFTUD2Q15029 972 aaKnown RBP eCLIP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-202ENST00000383836 NFRKBQ6P4R8 1299 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms