RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 ZCWPW1Q9H0M4 648 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 MEIS1O00470 390 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 A1BGP04217 495 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 SCG2P13521 617 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 CIITAP33076 1130 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 MAP3K10Q02779 954 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 ICA1Q05084 483 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 SPARCL1Q14515 664 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 CCDC142Q17RM4 750 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 BTBD6Q96KE9 485 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 FAM167BQ9BTA0 163 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 VPS11Q9H270 941 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 TRIM33Q9UPN9 1127 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 ZMYM6O95789 1325 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 MARK3P27448 753 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 DR1Q01658 176 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 THEMIS2Q5TEJ8 643 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 FASTKD5Q7L8L6 764 aaKnown RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 CCNYL1Q8N7R7 359 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 ASZ1Q8WWH4 475 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 PBXIP1Q96AQ6 731 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 OTUB1Q96FW1 271 aaPredicted RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 SAYSD1Q9NPB0 183 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 KLHL8Q9P2G9 620 aaPredicted RBP6.29□□□□□ -1.4
RFX3-204ENST00000382004 HPCAL4Q9UM19 191 aa6.29□□□□□ -1.4
RFX3-204ENST00000382004 NCOA1Q15788 1441 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 PSMA2P25787 234 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 COPS2P61201 443 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 LRRC8EQ6NSJ5 796 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 PBKQ96KB5 322 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 CYP4F11Q9HBI6 524 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 SELENONQ9NZV5 590 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ZFP69BQ9UJL9 534 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ASXL1Q8IXJ9 1541 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 ARMC2Q8NEN0 867 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 TMEM161AQ9NX61 479 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 CENPAP49450 140 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 KRT17Q04695 432 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 WASHC5Q12768 1159 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 KRT72Q14CN4 511 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 PPP6R3Q5H9R7 873 aaPredicted RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 EEPD1Q7L9B9 569 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 HDDC2Q7Z4H3 204 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ADCK1Q86TW2 530 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 PDIK1LQ8N165 341 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 FLCNQ8NFG4 579 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 RFWD2Q8NHY2 731 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 NEK9Q8TD19 979 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 SUCLG2Q96I99 432 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ZBED2Q9BTP6 218 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ADNPQ9H2P0 1102 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 NGRNQ9NPE2 291 aaKnown RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 NDFIP2Q9NV92 336 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 UBXN8O00124 270 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 AP2B1P63010 937 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 KCTD2Q14681 263 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 SLFN13Q68D06 897 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 SAAL1Q96ER3 474 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 SEL1LQ9UBV2 794 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ARHGAP26Q9UNA1 814 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 PCDHA1Q9Y5I3 950 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 A0A1B0GW55 424 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 H0Y626 953 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 TRIM16O95361 564 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 DUX4L2P0CJ85 424 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 DUX4L3P0CJ86 424 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 DUX4L4P0CJ87 422 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 DUX4L5P0CJ88 424 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 DUX4L6P0CJ89 424 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 DUX4L7P0CJ90 424 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 RBM6P78332 1123 aaKnown RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 STXBP2Q15833 593 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 MTERF2Q49AM1 385 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 KIAA1755Q5JYT7 1200 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 FAM47EQ6ZV65 393 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 CEP170P1Q96L14 293 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 DUX4Q9UBX2 424 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ARHGEF11O15085 1522 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 GUCA1CO95843 209 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 CHGBP05060 677 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ADD1P35611 737 aaKnown RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 CAPZA2P47755 286 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 MRPS25P82663 173 aaKnown RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 CCDC15Q0P6D6 951 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 MED21Q13503 144 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ARMCX2Q7L311 632 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 TTC8Q8TAM2 541 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 LARP4BQ92615 738 aaKnown RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 EDC3Q96F86 508 aaKnown RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 PPP1R36Q96LQ0 422 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 SRPK1Q96SB4 655 aaKnown RBP6.28□□□□□ -1.4
RFX3-204ENST00000382004 ZFYVE1Q9HBF4 777 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 DCTN4Q9UJW0 460 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 GRIN2BQ13224 1484 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 SERPIND1P05546 499 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ABCB5Q2M3G0 1257 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 ACCSLQ4AC99 568 aa6.28□□□□□ -1.4
RFX3-204ENST00000382004 TEDDM1Q5T9Z0 273 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms