RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 C4orf19Q8IY42 314 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 ZNF579Q8NAF0 562 aaKnown RBP17.34■□□□□ 0.37
PDGFB-202ENST00000381551 ATP8B4Q8TF62 1192 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 PPP1R13LQ8WUF5 828 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 LXNQ9BS40 222 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 NRBP2Q9NSY0 501 aa17.34■□□□□ 0.37
PDGFB-202ENST00000381551 WDR81Q562E7 1941 aa17.33■□□□□ 0.37
PDGFB-202ENST00000381551 A0A0U1RQG5 324 aaPredicted RBP17.33■□□□□ 0.36
PDGFB-202ENST00000381551 SMIM10L2AP0DMW4 78 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 SMIM10L2BP0DMW5 78 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 MUTP22033 750 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 CCT6AP40227 531 aaKnown RBP17.33■□□□□ 0.36
PDGFB-202ENST00000381551 UBA7P41226 1012 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 ATN1P54259 1190 aaPredicted RBP17.33■□□□□ 0.36
PDGFB-202ENST00000381551 PTPN11Q06124 597 aaPredicted RBP17.33■□□□□ 0.36
PDGFB-202ENST00000381551 SNX17Q15036 470 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 ECM1Q16610 540 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 XKR3Q5GH77 459 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 SPECC1Q5M775 1068 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 HAUS3Q68CZ6 603 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 USP49Q70CQ1 688 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 TRMT1LQ7Z2T5 733 aaKnown RBP17.33■□□□□ 0.36
PDGFB-202ENST00000381551 SESTD1Q86VW0 696 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 CKAP2LQ8IYA6 745 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 C7orf31Q8N865 590 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 SNX29Q8TEQ0 813 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 BBXQ8WY36 941 aaPredicted RBP17.33■□□□□ 0.36
PDGFB-202ENST00000381551 EPSTI1Q96J88 318 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 NIFKQ9BYG3 293 aaKnown RBP17.33■□□□□ 0.36
PDGFB-202ENST00000381551 CCSER1Q9C0I3 900 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 GDPD2Q9HCC8 539 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 HDAC6Q9UBN7 1215 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 DNAH12Q6ZR08 3092 aa17.33■□□□□ 0.36
PDGFB-202ENST00000381551 MYH9P35579 1960 aaKnown RBP17.33■□□□□ 0.36
PDGFB-202ENST00000381551 ZBTB39O15060 712 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 HBP1O60381 514 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 OATP04181 439 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 XRCC6P12956 609 aaKnown RBP eCLIP17.32■□□□□ 0.36
PDGFB-202ENST00000381551 INSRRP14616 1297 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 PRKCEQ02156 737 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 HIC1Q14526 733 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 ANO5Q75V66 913 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 CABP7Q86V35 215 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 FAM167AQ96KS9 214 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 SETD4Q9NVD3 440 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 GTF2IRD1Q9UHL9 959 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 TRPC6Q9Y210 931 aa17.32■□□□□ 0.36
PDGFB-202ENST00000381551 NRCAMQ92823 1304 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 A0A087WWV3 80 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 DDX11L8A8MPP1 907 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 SLC26A4O43511 780 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 HOXC8P31273 242 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 YWHABP31946 246 aaKnown RBP17.31■□□□□ 0.36
PDGFB-202ENST00000381551 FAM47CQ5HY64 1035 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 ZNF484Q5JVG2 852 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 HYIQ5T013 277 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 ADALQ6DHV7 355 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 SHC4Q6S5L8 630 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 SYMPKQ92797 1274 aaKnown RBP17.31■□□□□ 0.36
PDGFB-202ENST00000381551 PNMA5Q96PV4 448 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 NACC1Q96RE7 527 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 KIAA1024Q9UPX6 916 aa17.31■□□□□ 0.36
PDGFB-202ENST00000381551 TMEM150BA6NC51 233 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 ZBTB42B2RXF5 422 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 ADAM17P78536 824 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 PPFIA1Q13136 1202 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 GRB10Q13322 594 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 TARBP2Q15633 366 aaKnown RBP17.3■□□□□ 0.36
PDGFB-202ENST00000381551 GRIK4Q16099 956 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 MARCH8Q5T0T0 291 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 GDF6Q6KF10 455 aaPredicted RBP17.3■□□□□ 0.36
PDGFB-202ENST00000381551 POTEGQ6S5H5 508 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 CLEC17AQ6ZS10 378 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 OTUD6AQ7L8S5 288 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 ANKRD33Q7Z3H0 272 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 KCTD17Q8N5Z5 321 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 TOX2Q96NM4 488 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 ANKEF1Q9NU02 776 aa17.3■□□□□ 0.36
PDGFB-202ENST00000381551 C17orf102A2RUQ5 167 aa17.29■□□□□ 0.36
PDGFB-202ENST00000381551 RRN3P2A6NIE6 340 aa17.29■□□□□ 0.36
PDGFB-202ENST00000381551 ZNF200P98182 395 aaPredicted RBP17.29■□□□□ 0.36
PDGFB-202ENST00000381551 TLE2Q04725 743 aa17.29■□□□□ 0.36
PDGFB-202ENST00000381551 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
PDGFB-202ENST00000381551 FAM126BQ8IXS8 530 aa17.29■□□□□ 0.36
PDGFB-202ENST00000381551 PIGOQ8TEQ8 1089 aa17.29■□□□□ 0.36
PDGFB-202ENST00000381551 LMBR1Q8WVP7 490 aa17.29■□□□□ 0.36
PDGFB-202ENST00000381551 CEP89Q96ST8 783 aa17.29■□□□□ 0.36
PDGFB-202ENST00000381551 TRPV6Q9H1D0 765 aa17.29■□□□□ 0.36
PDGFB-202ENST00000381551 DDX19AQ9NUU7 478 aaKnown RBP17.29■□□□□ 0.36
PDGFB-202ENST00000381551 SEPT9Q9UHD8 586 aaPredicted RBP17.29■□□□□ 0.36
PDGFB-202ENST00000381551 MKI67P46013 3256 aaKnown RBP17.29■□□□□ 0.36
PDGFB-202ENST00000381551 MBLAC1A4D2B0 266 aaPredicted RBP17.28■□□□□ 0.36
PDGFB-202ENST00000381551 CD4P01730 458 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 GNAT1P11488 350 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 CMA1P23946 247 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 NPEPPSP55786 919 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 RTP1P59025 263 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 IGBP1P78318 339 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 KARSQ15046 597 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms