RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 WDR18Q9BV38 432 aa12.75□□□□□ -0.37
PITRM1-202ENST00000380989 FAM207AQ9NSI2 230 aaPredicted RBP12.75□□□□□ -0.37
PITRM1-202ENST00000380989 IREB2P48200 963 aaKnown RBP12.75□□□□□ -0.37
PITRM1-202ENST00000380989 AARSP49588 968 aaKnown RBP eCLIP12.75□□□□□ -0.37
PITRM1-202ENST00000380989 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
PITRM1-202ENST00000380989 PRPF38AQ8NAV1 312 aaKnown RBP12.75□□□□□ -0.37
PITRM1-202ENST00000380989 ZC3H15Q8WU90 426 aaKnown RBP12.75□□□□□ -0.37
PITRM1-202ENST00000380989 RNPC3Q96LT9 517 aaKnown RBP12.75□□□□□ -0.37
PITRM1-202ENST00000380989 NHEJ1Q9H9Q4 299 aaPredicted RBP12.75□□□□□ -0.37
PITRM1-202ENST00000380989 AS3MTQ9HBK9 375 aa12.75□□□□□ -0.37
PITRM1-202ENST00000380989 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 SKAP2O75563 359 aaPredicted RBP12.74□□□□□ -0.37
PITRM1-202ENST00000380989 CDC25CP30307 473 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 GJA5P36382 358 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 CARSP49589 748 aaKnown RBP12.74□□□□□ -0.37
PITRM1-202ENST00000380989 MRPL12P52815 198 aaKnown RBP12.74□□□□□ -0.37
PITRM1-202ENST00000380989 ATP2C1P98194 919 aaPredicted RBP12.74□□□□□ -0.37
PITRM1-202ENST00000380989 PLS1Q14651 629 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 PNMA8AQ86V59 439 aaPredicted RBP12.74□□□□□ -0.37
PITRM1-202ENST00000380989 OPTNQ96CV9 577 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 ZIM3Q96PE6 472 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 NAA15Q9BXJ9 866 aaKnown RBP12.74□□□□□ -0.37
PITRM1-202ENST00000380989 NFU1Q9UMS0 254 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 ESYT2A0FGR8 921 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 KRT25Q7Z3Z0 450 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 LPAR1Q92633 364 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 SCN4AP35499 1836 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 EIF3HO15372 352 aaKnown RBP eCLIP12.74□□□□□ -0.37
PITRM1-202ENST00000380989 NF2P35240 595 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 TECP42680 631 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 TXKP42681 527 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 SH3RF1Q7Z6J0 888 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 CREG2Q8IUH2 290 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 ANO3Q9BYT9 981 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 GBP3Q9H0R5 595 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 PPANQ9NQ55 473 aaKnown RBP12.74□□□□□ -0.37
PITRM1-202ENST00000380989 RBM12Q9NTZ6 932 aaKnown RBP12.74□□□□□ -0.37
PITRM1-202ENST00000380989 PPP1R9AQ9ULJ8 1098 aa12.74□□□□□ -0.37
PITRM1-202ENST00000380989 EIF4E1BA6NMX2 242 aaKnown RBP12.73□□□□□ -0.37
PITRM1-202ENST00000380989 GLI1P08151 1106 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 FCER1AP12319 257 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 MAP2K2P36507 400 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 IFT88Q13099 833 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 E2F5Q15329 346 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 GALNT17Q6IS24 598 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 OR8K1Q8NGG5 319 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 COL20A1Q9P218 1284 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 VWA5AO00534 786 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 MB21D1Q8N884 522 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 TRIM47Q96LD4 638 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 SLC38A10Q9HBR0 1119 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 SYNPO2Q9UMS6 1093 aa12.73□□□□□ -0.37
PITRM1-202ENST00000380989 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
PITRM1-202ENST00000380989 NOL9Q5SY16 702 aaKnown RBP12.72□□□□□ -0.37
PITRM1-202ENST00000380989 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 ANKRD13AQ8IZ07 590 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 ANKRD20A12PQ8NF67 263 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 CCDC43Q96MW1 224 aaKnown RBP12.72□□□□□ -0.37
PITRM1-202ENST00000380989 TMOD4Q9NZQ9 345 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 CEP131Q9UPN4 1083 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 CEP350Q5VT06 3117 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 COL11A1P12107 1806 aaPredicted RBP12.72□□□□□ -0.37
PITRM1-202ENST00000380989 hCG_1984214I3L0E3 225 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 CELF2O95319 508 aaKnown RBP12.72□□□□□ -0.37
PITRM1-202ENST00000380989 TMEM132BQ14DG7 1078 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 ZNF713Q8N859 430 aaPredicted RBP12.72□□□□□ -0.37
PITRM1-202ENST00000380989 ACBD3Q9H3P7 528 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 WDR90Q96KV7 1748 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 RPN1P04843 607 aaKnown RBP12.72□□□□□ -0.37
PITRM1-202ENST00000380989 ARID5AQ03989 594 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 NNTQ13423 1086 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 DDX42Q86XP3 938 aaKnown RBP eCLIP12.72□□□□□ -0.37
PITRM1-202ENST00000380989 CEP57Q86XR8 500 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 TRIML1Q8N9V2 468 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 SPATA4Q8NEY3 305 aa12.72□□□□□ -0.37
PITRM1-202ENST00000380989 AENQ8WTP8 325 aaKnown RBP12.72□□□□□ -0.37
PITRM1-202ENST00000380989 POTEMA6NI47 508 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 FAM86B1E9PN63 330 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 ICAM1P05362 532 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 FAM86B2P0C5J1 330 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 TMOD1P28289 359 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 PSEN1P49768 467 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 PDXDC2PQ6P474 469 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 CTAGE1Q96RT6 745 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 LIMA1Q9UHB6 759 aaKnown RBP12.71□□□□□ -0.37
PITRM1-202ENST00000380989 SPDYE3A6NKU9 549 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 SHOX2O60902 331 aaPredicted RBP12.71□□□□□ -0.37
PITRM1-202ENST00000380989 TRAPPC10P48553 1259 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 SNRNP48Q6IEG0 339 aaKnown RBP12.71□□□□□ -0.37
PITRM1-202ENST00000380989 PPP1R18Q6NYC8 613 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 NSMFQ6X4W1 530 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 CATSPERGQ6ZRH7 1159 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 CLEC4DQ8WXI8 215 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 GSDMAQ96QA5 445 aa12.71□□□□□ -0.37
PITRM1-202ENST00000380989 CTDP1Q9Y5B0 961 aaPredicted RBP12.71□□□□□ -0.37
PITRM1-202ENST00000380989 ZNF233A6NK53 670 aa12.71□□□□□ -0.38
PITRM1-202ENST00000380989 SPDYE16A6NNV3 312 aaPredicted RBP12.71□□□□□ -0.38
PITRM1-202ENST00000380989 FTCDO95954 541 aa12.71□□□□□ -0.38
PITRM1-202ENST00000380989 GFPT1Q06210 699 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms