RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 SNX3O60493 162 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 TAF5LO75529 589 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 SERPINB7O75635 380 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 CPA3P15088 417 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 HOXD11P31277 338 aaPredicted RBP7.14□□□□□ -1.27
RIPK1-202ENST00000380409 TCF7P36402 384 aaPredicted RBP7.14□□□□□ -1.27
RIPK1-202ENST00000380409 WDR78Q5VTH9 848 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 TRIM68Q6AZZ1 485 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 SLC2A7Q6PXP3 512 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 PALB2Q86YC2 1186 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 RETREG2Q8NC44 543 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 NRG4Q8WWG1 115 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 DNAJC9Q8WXX5 260 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 BHMT2Q9H2M3 363 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 RBM12Q9NTZ6 932 aaKnown RBP7.14□□□□□ -1.27
RIPK1-202ENST00000380409 CCDC87Q9NVE4 849 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 NFU1Q9UMS0 254 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 DAAM1Q9Y4D1 1078 aa7.14□□□□□ -1.27
RIPK1-202ENST00000380409 PLEKHG3A1L390 1219 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 ZSCAN5CA6NGD5 496 aaPredicted RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 LCA5LO95447 670 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 VAV2P52735 878 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 CACNA2D1P54289 1103 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 PTK7Q13308 1070 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 R3HDM1Q15032 1099 aaKnown RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 TMEM67Q5HYA8 995 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 TRMT44Q8IYL2 757 aaKnown RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 MIGA1Q8NAN2 632 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 TBC1D16Q8TBP0 767 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 ABHD8Q96I13 439 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 ZNF496Q96IT1 587 aaPredicted RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 TMEM237Q96Q45 408 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 TUBGCP5Q96RT8 1024 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 LRMDAQ9H2I8 198 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 FAIMQ9NVQ4 179 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 USP20Q9Y2K6 914 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 SLC12A7Q9Y666 1083 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 SLIT3O75094 1523 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 TNS3Q68CZ2 1445 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 CCDC162PA2VCL2 907 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 O00370 1275 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 P4HA2O15460 535 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 ACTN4O43707 911 aaKnown RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 ATP2C2O75185 946 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 TPPPO94811 219 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 BDNFP23560 247 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 PFKPQ01813 784 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 MCMDC2Q4G0Z9 681 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 SH3D19Q5HYK7 790 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 SPDYCQ5MJ68 293 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 WDR60Q8WVS4 1066 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 BHMTQ93088 406 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 EAF2Q96CJ1 260 aaPredicted RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 IRF2BPLQ9H1B7 796 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 THAP9Q9H5L6 903 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 TLE6Q9H808 572 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 VAT1LQ9HCJ6 419 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 ZNF148Q9UQR1 794 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 N6AMT1Q9Y5N5 214 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 MAGEA13PA6NCF6 341 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 TACC1O75410 805 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 CD44P16070 742 aaKnown RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 IGHMBP2P38935 993 aaKnown RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 CCNFP41002 786 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 IARSP41252 1262 aaKnown RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 AFMP43652 599 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 ACADVLP49748 655 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 KIF23Q02241 960 aaPredicted RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 SPIDRQ14159 915 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 SPATA1Q5VX52 437 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 IFT20Q8IY31 132 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 CCDC24Q8N4L8 307 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 SEC14L1Q92503 715 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 NR1H4Q96RI1 486 aaPredicted RBP7.13□□□□□ -1.27
RIPK1-202ENST00000380409 FAM114A2Q9NRY5 505 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 SCOCQ9UIL1 159 aa7.13□□□□□ -1.27
RIPK1-202ENST00000380409 ZNF609O15014 1411 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 ZNF263O14978 683 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 SART1O43290 800 aaKnown RBP7.12□□□□□ -1.27
RIPK1-202ENST00000380409 HPDP32754 393 aaPredicted RBP7.12□□□□□ -1.27
RIPK1-202ENST00000380409 SERPINB4P48594 390 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 CTAG1AP78358 180 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 LIN52Q52LA3 116 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 FAM133BQ5BKY9 247 aaKnown RBP7.12□□□□□ -1.27
RIPK1-202ENST00000380409 SUPT20HQ8NEM7 779 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 CTAGE1Q96RT6 745 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 DHX36Q9H2U1 1008 aaKnown RBP7.12□□□□□ -1.27
RIPK1-202ENST00000380409 EPB41L4BQ9H329 900 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 PAG1Q9NWQ8 432 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 CTTNBP2NLQ9P2B4 639 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 FAM32AQ9Y421 112 aaKnown RBP7.12□□□□□ -1.27
RIPK1-202ENST00000380409 HEY1Q9Y5J3 304 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 NUMBLQ9Y6R0 609 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 RGPD8O14715 1765 aaPredicted RBP7.12□□□□□ -1.27
RIPK1-202ENST00000380409 GCOM1H8Y6P7 765 aaPredicted RBP7.12□□□□□ -1.27
RIPK1-202ENST00000380409 SHBGP04278 402 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 MYZAPP0CAP1 466 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 CDC25AP30304 524 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 CDK7P50613 346 aa7.12□□□□□ -1.27
RIPK1-202ENST00000380409 PSMC1P62191 440 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms