RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 FECHP22830 423 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 EDRF1Q3B7T1 1238 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 PPP4R3CPQ6ZMV5 832 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 NLRX1Q86UT6 975 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 TAF1DQ9H5J8 278 aaPredicted RBP21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 PARVGQ9HBI0 331 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 CAPN11Q9UMQ6 739 aa21.94■■□□□ 1.1
PDLIM5-205ENST00000380180 RASSF10A6NK89 507 aa21.93■■□□□ 1.1
PDLIM5-205ENST00000380180 ZSCAN12O43309 604 aa21.93■■□□□ 1.1
PDLIM5-205ENST00000380180 CCNE2O96020 404 aa21.93■■□□□ 1.1
PDLIM5-205ENST00000380180 ADAM9Q13443 819 aa21.93■■□□□ 1.1
PDLIM5-205ENST00000380180 ZNF592Q92610 1267 aa21.93■■□□□ 1.1
PDLIM5-205ENST00000380180 TRAF3IP3Q9Y228 551 aa21.93■■□□□ 1.1
PDLIM5-205ENST00000380180 LUC7L2Q9Y383 392 aaKnown RBP21.93■■□□□ 1.1
PDLIM5-205ENST00000380180 MYH9P35579 1960 aaKnown RBP21.93■■□□□ 1.1
PDLIM5-205ENST00000380180 KRT76Q01546 638 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 BMT2Q1RMZ1 405 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 RAD9BQ6WBX8 426 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 ZC3H3Q8IXZ2 948 aaKnown RBP21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 NUP58Q9BVL2 599 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 ODF2LQ9ULJ1 636 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 GUCY2CP25092 1073 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 SFNP31947 248 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 JAK3P52333 1124 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 ZNF131P52739 623 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 CCDC40Q4G0X9 1142 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 ANKRD35Q8N283 1001 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 PCMTD1Q96MG8 357 aaPredicted RBP21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 TTYH3Q9C0H2 523 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 KCNH4Q9UQ05 1017 aa21.92■■□□□ 1.1
PDLIM5-205ENST00000380180 ZC3H4Q9UPT8 1303 aaKnown RBP21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 WDR64B1ANS9 1081 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 PDXKO00764 312 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 LYPLA2O95372 231 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 GNA14O95837 355 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 TRIM21P19474 475 aaKnown RBP21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 NMT1P30419 496 aaKnown RBP21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 IRX3P78415 501 aaPredicted RBP21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 KCNA1Q09470 495 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 UGCGQ16739 394 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 PADI6Q6TGC4 694 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 RIOX2Q8IUF8 465 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 TMTC1Q8IUR5 882 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 RETREG2Q8NC44 543 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 DESI2Q9BSY9 194 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 TCEAL9Q9UHQ7 104 aa21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 DBR1Q9UK59 544 aaKnown RBP21.91■■□□□ 1.1
PDLIM5-205ENST00000380180 KIF2AO00139 706 aaPredicted RBP21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 NR2F2P24468 414 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 CNTN2Q02246 1040 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 PPIL2Q13356 520 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 OR8K1Q8NGG5 319 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 FIZ1Q96SL8 496 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 ASCC2Q9H1I8 757 aaPredicted RBP21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 SEL1LQ9UBV2 794 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 PAXBP1Q9Y5B6 917 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 UQCRHLA0A096LP55 91 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 IQCA1LA6NCM1 817 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 CETN3O15182 167 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 STAM2O75886 525 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 UQCRHP07919 91 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 KCNA2P16389 499 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 YWHABP31946 246 aaKnown RBP21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 RARRES1P49788 294 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 MARSP56192 900 aaKnown RBP21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 PSMC5P62195 406 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 ERVK-24P63145 666 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 ARMC9Q7Z3E5 817 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 C4orf19Q8IY42 314 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 MYRIPQ8NFW9 859 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 OPTNQ96CV9 577 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 DNAJC7Q99615 494 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 SPATC1LQ9H0A9 340 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 AGPAT5Q9NUQ2 364 aa21.9■■□□□ 1.1
PDLIM5-205ENST00000380180 EIF3DO15371 548 aaKnown RBP eCLIP21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 CALUO43852 315 aaPredicted RBP21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 HIP1RO75146 1068 aa21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 ZC2HC1CQ53FD0 456 aaPredicted RBP21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 ZNF746Q6NUN9 644 aaPredicted RBP21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 CYP26C1Q6V0L0 522 aa21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 ZNF720Q7Z2F6 126 aa21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 DNERQ8NFT8 737 aa21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 IWS1Q96ST2 819 aa21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 SENP7Q9BQF6 1050 aa21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 MOV10L1Q9BXT6 1211 aaKnown RBP21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 TYW1Q9NV66 732 aaKnown RBP21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 FBXO40Q9UH90 709 aa21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 AGTPBP1Q9UPW5 1226 aa21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 SIK3Q9Y2K2 1263 aa21.89■■□□□ 1.1
PDLIM5-205ENST00000380180 ZNFX1Q9P2E3 1918 aaKnown RBP21.89■■□□□ 1.09
PDLIM5-205ENST00000380180 HERVK_113P62684 666 aa21.89■■□□□ 1.09
PDLIM5-205ENST00000380180 MAPK7Q13164 816 aa21.89■■□□□ 1.09
PDLIM5-205ENST00000380180 FIGNQ5HY92 759 aa21.89■■□□□ 1.09
PDLIM5-205ENST00000380180 ODR4Q5SWX8 454 aa21.89■■□□□ 1.09
PDLIM5-205ENST00000380180 FAM178BQ8IXR5 827 aa21.89■■□□□ 1.09
PDLIM5-205ENST00000380180 DAW1Q8N136 415 aa21.89■■□□□ 1.09
PDLIM5-205ENST00000380180 SH2D3AQ9BRG2 576 aa21.89■■□□□ 1.09
PDLIM5-205ENST00000380180 PAGR1Q9BTK6 254 aa21.89■■□□□ 1.09
PDLIM5-205ENST00000380180 PCDHA10Q9Y5I2 948 aa21.89■■□□□ 1.09
PDLIM5-205ENST00000380180 ASTN1O14525 1302 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms