RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 MDH1P40925 334 aaKnown RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 CLK2P49760 499 aaKnown RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 TNNC1P63316 161 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 QPCTQ16769 361 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 ASPRV1Q53RT3 343 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 ODF2Q5BJF6 829 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 CATSPER3Q86XQ3 398 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 U2AF1L4Q8WU68 220 aaKnown RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 RUBCNQ92622 972 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 RPGRQ92834 1020 aaKnown RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 REEP2Q9BRK0 252 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 TRIM51Q9BSJ1 452 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 EDEM3Q9BZQ6 932 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 LUC7LQ9NQ29 371 aaKnown RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 CNOT8Q9UFF9 292 aaKnown RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 THRAP3Q9Y2W1 955 aaKnown RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 MEFVO15553 781 aaPredicted RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 ABCB4P21439 1286 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 SLC12A3P55017 1021 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 PRPF4BQ13523 1007 aaKnown RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 EXOC3L4Q17RC7 722 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 USH1GQ495M9 461 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 DPY19L2P1Q6NXN4 242 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 PEX26Q7Z412 305 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 DAAM2Q86T65 1068 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 ZFPM1Q8IX07 1006 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 CYP2W1Q8TAV3 490 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 SYN2Q92777 582 aaPredicted RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 CEP63Q96MT8 703 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 ARMCX3Q9UH62 379 aaPredicted RBP9.54□□□□□ -0.88
TRIM6-203ENST00000380107 TMEM59LQ9UK28 342 aa9.54□□□□□ -0.88
TRIM6-203ENST00000380107 GCOM1H8Y6P7 765 aaPredicted RBP9.53□□□□□ -0.88
TRIM6-203ENST00000380107 ZBTB39O15060 712 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 TTLL1O95922 423 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 MYZAPP0CAP1 466 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 GUCY2CP25092 1073 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 HSPA9P38646 679 aaKnown RBP9.53□□□□□ -0.88
TRIM6-203ENST00000380107 USP11P51784 963 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 MRPL12P52815 198 aaKnown RBP9.53□□□□□ -0.88
TRIM6-203ENST00000380107 ZNF844Q08AG5 666 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 QRICH1Q2TAL8 776 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 GPATCH11Q8N954 259 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 LRRC57Q8N9N7 239 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 TPCN2Q8NHX9 752 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 MDM1Q8TC05 714 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 WHAMMQ8TF30 809 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 LRRC27Q9C0I9 530 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 NUCKS1Q9H1E3 243 aaKnown RBP9.53□□□□□ -0.88
TRIM6-203ENST00000380107 ISCUQ9H1K1 167 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 DHX36Q9H2U1 1008 aaKnown RBP9.53□□□□□ -0.88
TRIM6-203ENST00000380107 TMBIM4Q9HC24 238 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.53□□□□□ -0.88
TRIM6-203ENST00000380107 RNF14Q9UBS8 474 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 CHORDC1Q9UHD1 332 aaPredicted RBP9.53□□□□□ -0.88
TRIM6-203ENST00000380107 GGA1Q9UJY5 639 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 NOVA2Q9UNW9 492 aaKnown RBP9.53□□□□□ -0.88
TRIM6-203ENST00000380107 PCDHA1Q9Y5I3 950 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 PCDHAC2Q9Y5I4 1007 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 GOLGA6L10A6NI86 522 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 SMIM23A6NLE4 172 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 H0YGN5 161 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 ZBTB5O15062 677 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 SNHG28P0DPA3 235 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 SMARCA1P28370 1054 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 FNTAP49354 379 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 TCP10Q12799 353 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 NFIAQ12857 509 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 ZNF211Q13398 564 aaPredicted RBP9.53□□□□□ -0.88
TRIM6-203ENST00000380107 MKRN4PQ13434 485 aaPredicted RBP9.53□□□□□ -0.88
TRIM6-203ENST00000380107 GIT2Q14161 759 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 AADACL2Q6P093 401 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 B4GALNT4Q76KP1 1039 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 MREGQ8N565 214 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 SCFD2Q8WU76 684 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 NT5C3AQ9H0P0 336 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 CD248Q9HCU0 757 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 RGL1Q9NZL6 768 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 GCNT4Q9P109 453 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 NFS1Q9Y697 457 aa9.53□□□□□ -0.88
TRIM6-203ENST00000380107 IGSF9BQ9UPX0 1349 aa9.52□□□□□ -0.88
TRIM6-203ENST00000380107 DDX3XO00571 662 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 GCNT3O95395 438 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 AFPP02771 609 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 XRCC5P13010 732 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 HOXA13P31271 388 aaPredicted RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 SHMT1P34896 483 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 GABPAQ06546 454 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 ORC2Q13416 577 aaPredicted RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 SF3B2Q13435 895 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 COG2Q14746 738 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 ZC2HC1CQ53FD0 456 aaPredicted RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 UBAP2Q5T6F2 1119 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 PRR5LQ6MZQ0 368 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 GLYCTKQ8IVS8 523 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 UHMK1Q8TAS1 419 aaKnown RBP9.52□□□□□ -0.89
TRIM6-203ENST00000380107 PIGOQ8TEQ8 1089 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 RUSC1Q9BVN2 902 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 ANO3Q9BYT9 981 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 BHMT2Q9H2M3 363 aa9.52□□□□□ -0.89
TRIM6-203ENST00000380107 SEPT11Q9NVA2 429 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms